Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL360081.1-201ENST00000428299 555 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC091390.1-201ENST00000433904 331 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AL049745.1-201ENST00000433953 286 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC016831.4-201ENST00000438302 307 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC4P56524 MTND2P8-201ENST00000450555 1025 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC090142.1-201ENST00000465776 462 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC108751.2-201ENST00000469993 231 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC011005.3-201ENST00000491624 395 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 RPL36AP41-201ENST00000493820 306 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
HDAC4P56524 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC4P56524 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC4P56524 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.87□□□□□ -1.63
HDAC4P56524 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.87□□□□□ -1.63
HDAC4P56524 AL450336.1-201ENST00000605180 586 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC090948.2-201ENST00000607363 564 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 MIR378J-201ENST00000611988 109 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC4P56524 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC4P56524 AL121873.1-201ENST00000616013 524 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AL035461.2-201ENST00000619201 524 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AP000346.3-201ENST00000622821 210 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.87□□□□□ -1.63
HDAC4P56524 AL109659.3-201ENST00000624985 950 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 U6.107-201ENST00000637108 79 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 LINC01808-202ENST00000641680 1116 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC4P56524 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC4P56524 MAPK10-304ENST00000641341 3984 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC4P56524 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC4P56524 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 AL136164.3-201ENST00000624429 3978 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 AL590240.1-201ENST00000334118 313 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 RNU6-236P-201ENST00000363886 106 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
HDAC4P56524 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 AL592310.1-201ENST00000414330 671 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 AL449283.1-202ENST00000418249 604 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC4P56524 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 NANOGP5-201ENST00000424456 877 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.86□□□□□ -1.63
HDAC4P56524 MTND2P5-201ENST00000432656 1006 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 TPTE2P6-202ENST00000445572 1007 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 H2AFZP5-201ENST00000446960 382 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 EIF2S2P2-201ENST00000447161 982 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 RN7SL481P-201ENST00000477764 299 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC4P56524 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.86□□□□□ -1.63
HDAC4P56524 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC008565.1-201ENST00000509046 885 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 AC104108.1-201ENST00000509930 412 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 VWA8P1-201ENST00000510889 176 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 RNU6-1028P-201ENST00000517164 93 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.86□□□□□ -1.63
HDAC4P56524 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC079075.1-201ENST00000559543 878 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.86□□□□□ -1.63
HDAC4P56524 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC024060.1-201ENST00000607052 494 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HDAC4P56524 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HDAC4P56524 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.86□□□□□ -1.63
HDAC4P56524 AC100871.1-201ENST00000507871 1456 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HDAC4P56524 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HDAC4P56524 AL672167.1-203ENST00000641299 2975 ntBASIC4.86□□□□□ -1.63
HDAC4P56524 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HDAC4P56524 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms