Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SFR1P2-201ENST00000421841 730 ntBASIC4.36□□□□□ -1.71
PDX1P52945 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.36□□□□□ -1.71
PDX1P52945 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.36□□□□□ -1.71
PDX1P52945 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 ACTR3P2-201ENST00000439585 1257 ntBASIC4.36□□□□□ -1.71
PDX1P52945 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 SEPT14P24-201ENST00000447236 180 ntBASIC4.36□□□□□ -1.71
PDX1P52945 snoU109.3-201ENST00000459477 145 ntBASIC4.36□□□□□ -1.71
PDX1P52945 RPL23AP37-201ENST00000479658 549 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC026414.1-201ENST00000504046 698 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC098799.3-201ENST00000506095 438 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC096571.1-202ENST00000506634 735 ntBASIC4.36□□□□□ -1.71
PDX1P52945 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.36□□□□□ -1.71
PDX1P52945 AC008565.1-201ENST00000509046 885 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.36□□□□□ -1.71
PDX1P52945 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.36□□□□□ -1.71
PDX1P52945 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 SULT1C2P2-201ENST00000562517 294 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC027104.1-201ENST00000563702 681 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC015912.2-201ENST00000571053 181 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 COX6CP4-201ENST00000605798 228 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC034229.4-201ENST00000607861 441 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC024941.1-201ENST00000612250 334 ntBASIC4.36□□□□□ -1.71
PDX1P52945 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.36□□□□□ -1.71
PDX1P52945 AC139713.2-210ENST00000641741 992 ntBASIC4.36□□□□□ -1.71
PDX1P52945 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.36□□□□□ -1.71
PDX1P52945 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 DDX18P4-201ENST00000511690 1966 ntBASIC4.36□□□□□ -1.71
PDX1P52945 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.36□□□□□ -1.71
PDX1P52945 AC006042.3-201ENST00000454684 1469 ntBASIC4.36□□□□□ -1.71
PDX1P52945 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PDX1P52945 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 AC090017.1-201ENST00000548612 1779 ntBASIC4.35□□□□□ -1.71
PDX1P52945 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PDX1P52945 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PDX1P52945 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDX1P52945 SEC63P2-201ENST00000503863 1939 ntBASIC4.35□□□□□ -1.71
PDX1P52945 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDX1P52945 MTCO2P8-201ENST00000412213 658 ntBASIC4.35□□□□□ -1.71
PDX1P52945 RPL23AP26-201ENST00000412728 464 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC011933.1-201ENST00000413334 321 ntBASIC4.35□□□□□ -1.71
PDX1P52945 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 AL358176.3-201ENST00000420757 454 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 CDY14P-201ENST00000431260 1014 ntBASIC4.35□□□□□ -1.71
PDX1P52945 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 OR4C10P-201ENST00000434991 931 ntBASIC4.35□□□□□ -1.71
PDX1P52945 CDY12P-201ENST00000440679 1015 ntBASIC4.35□□□□□ -1.71
PDX1P52945 RRM2P4-201ENST00000441721 562 ntBASIC4.35□□□□□ -1.71
PDX1P52945 CDY13P-201ENST00000445813 1015 ntBASIC4.35□□□□□ -1.71
PDX1P52945 CDY23P-201ENST00000451661 1014 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC002553.2-201ENST00000453217 340 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC116533.1-201ENST00000459748 321 ntBASIC4.35□□□□□ -1.71
PDX1P52945 RPL23AP12-201ENST00000467573 473 ntBASIC4.35□□□□□ -1.71
PDX1P52945 RPL21P6-201ENST00000479171 504 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC041039.1-201ENST00000485656 536 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC091167.1-201ENST00000492017 396 ntBASIC4.35□□□□□ -1.71
PDX1P52945 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.35□□□□□ -1.71
PDX1P52945 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.35□□□□□ -1.71
PDX1P52945 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 RNU6-276P-201ENST00000516114 96 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 AC091163.3-201ENST00000518269 1144 ntBASIC4.35□□□□□ -1.71
PDX1P52945 HMGB1P23-201ENST00000518743 568 ntBASIC4.35□□□□□ -1.71
PDX1P52945 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 PSMB7P1-201ENST00000556349 514 ntBASIC4.35□□□□□ -1.71
PDX1P52945 VN1R87P-201ENST00000596706 487 ntBASIC4.35□□□□□ -1.71
PDX1P52945 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 AL353600.1-201ENST00000608148 251 ntBASIC4.35□□□□□ -1.71
PDX1P52945 U6.48-201ENST00000618523 106 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC091046.2-201ENST00000620775 665 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AL023881.1-201ENST00000621088 301 ntBASIC4.35□□□□□ -1.71
PDX1P52945 AC024595.1-201ENST00000623088 387 ntBASIC4.35□□□□□ -1.71
PDX1P52945 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.35□□□□□ -1.71
PDX1P52945 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PDX1P52945 AP001273.1-201ENST00000624493 3152 ntBASIC4.35□□□□□ -1.71
PDX1P52945 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.34□□□□□ -1.71
PDX1P52945 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDX1P52945 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms