Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC106730.3-201ENST00000624568 641 ntBASIC4.35□□□□□ -1.71
BRCC3P46736 AP003400.6-201ENST00000624698 740 ntBASIC4.35□□□□□ -1.71
BRCC3P46736 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
BRCC3P46736 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
BRCC3P46736 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
BRCC3P46736 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.34□□□□□ -1.71
BRCC3P46736 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCC3P46736 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
BRCC3P46736 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCC3P46736 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCC3P46736 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
BRCC3P46736 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 HDGFP1-201ENST00000405943 252 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 CYCSP19-201ENST00000411715 316 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AL160275.2-201ENST00000412010 394 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRCC3P46736 CACYBPP1-201ENST00000438592 684 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 XKRY2-201ENST00000442362 1093 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 RPL29P14-201ENST00000495837 428 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 HMGB1P3-201ENST00000502802 616 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BRCC3P46736 RNU1-45P-201ENST00000517191 141 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.34□□□□□ -1.71
BRCC3P46736 MTCO1P49-201ENST00000523429 802 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.34□□□□□ -1.71
BRCC3P46736 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 OR4H6P-202ENST00000603819 340 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC005972.3-201ENST00000606304 481 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC242628.1-201ENST00000606810 391 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 AL158196.1-201ENST00000616786 434 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AP006248.3-201ENST00000623580 594 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 AC138907.10-201ENST00000623708 983 ntBASIC4.34□□□□□ -1.71
BRCC3P46736 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.34□□□□□ -1.71
BRCC3P46736 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.34□□□□□ -1.71
BRCC3P46736 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
BRCC3P46736 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
BRCC3P46736 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
BRCC3P46736 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
BRCC3P46736 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRCC3P46736 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRCC3P46736 AC107027.3-201ENST00000565095 3473 ntBASIC4.34□□□□□ -1.72
BRCC3P46736 NOL8P1-201ENST00000508336 3529 ntBASIC4.34□□□□□ -1.72
BRCC3P46736 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
BRCC3P46736 AL445437.1-201ENST00000623157 3087 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCC3P46736 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BRCC3P46736 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 SNORA60-201ENST00000362396 134 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 AC019155.1-201ENST00000382242 574 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 RNU6-225P-201ENST00000384613 103 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 RANP4-201ENST00000413361 655 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC073464.3-201ENST00000422564 712 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCC3P46736 IPMKP1-201ENST00000425988 855 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.33□□□□□ -1.72
BRCC3P46736 AC023512.1-201ENST00000444513 499 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC044797.1-201ENST00000445744 679 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCC3P46736 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCC3P46736 RPL36AP13-201ENST00000457490 317 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC021205.1-201ENST00000468797 348 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC091959.2-201ENST00000477363 321 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 GAPDHP36-201ENST00000480688 918 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC090543.1-201ENST00000492168 485 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.33□□□□□ -1.72
BRCC3P46736 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
BRCC3P46736 SETP12-201ENST00000514068 805 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCC3P46736 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.33□□□□□ -1.72
BRCC3P46736 AC012417.1-201ENST00000582307 1039 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.33□□□□□ -1.72
BRCC3P46736 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRCC3P46736 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.33□□□□□ -1.72
BRCC3P46736 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.33□□□□□ -1.72
BRCC3P46736 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.33□□□□□ -1.72
BRCC3P46736 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BRCC3P46736 AC103798.2-201ENST00000624292 632 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AP000720.1-201ENST00000625091 483 ntBASIC4.33□□□□□ -1.72
BRCC3P46736 AC055839.1-201ENST00000634467 498 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms