Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MIR199A2-201ENST00000385289 110 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 RN7SKP156-201ENST00000410308 342 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.18□□□□□ -1.74
TNFSF9P41273 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 RPS26P47-201ENST00000427219 348 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFSF9P41273 BUD31P2-201ENST00000449374 300 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 RPL31P20-201ENST00000449593 360 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 CLIC4P1-201ENST00000453177 535 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.18□□□□□ -1.74
TNFSF9P41273 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFSF9P41273 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFSF9P41273 RN7SKP141-201ENST00000516167 338 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFSF9P41273 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.18□□□□□ -1.74
TNFSF9P41273 CYCSP30-201ENST00000546447 172 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.18□□□□□ -1.74
TNFSF9P41273 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.18□□□□□ -1.74
TNFSF9P41273 AC079684.1-201ENST00000621405 437 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 AC112200.1-201ENST00000625015 234 ntBASIC4.18□□□□□ -1.74
TNFSF9P41273 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TNFSF9P41273 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TNFSF9P41273 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.18□□□□□ -1.74
TNFSF9P41273 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.18□□□□□ -1.74
TNFSF9P41273 AC009313.2-201ENST00000417893 1941 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 BX005019.1-201ENST00000561881 1810 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFSF9P41273 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 OR4A15-201ENST00000314706 1035 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 RNA5SP124-201ENST00000362739 110 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 SNORD74.4-201ENST00000364129 80 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 RNU6-1251P-201ENST00000364502 107 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 U8.11-201ENST00000384699 133 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 U8.12-201ENST00000384701 133 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 RN7SKP247-201ENST00000411094 308 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFSF9P41273 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 OR6K4P-201ENST00000423179 955 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFSF9P41273 CALM1P2-201ENST00000452941 448 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 EIF2S2P5-201ENST00000457635 968 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.17□□□□□ -1.74
TNFSF9P41273 U8.18-201ENST00000459285 133 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 AC021205.1-201ENST00000468797 348 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 NDUFB4P12-201ENST00000513465 390 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFSF9P41273 HMGB1P19-201ENST00000517578 577 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 SEC11B-201ENST00000518383 499 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 IGHV3-63-201ENST00000518422 341 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFSF9P41273 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFSF9P41273 AC007991.1-201ENST00000522680 631 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.17□□□□□ -1.74
TNFSF9P41273 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFSF9P41273 AC027281.1-201ENST00000574178 758 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.17□□□□□ -1.74
TNFSF9P41273 CCDC58P3-201ENST00000590792 430 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 AL451086.1-201ENST00000605596 223 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 AC026368.1-201ENST00000614934 690 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 AC145207.9-201ENST00000623802 325 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 AC097504.1-201ENST00000515103 2415 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.17□□□□□ -1.74
TNFSF9P41273 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TNFSF9P41273 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.17□□□□□ -1.74
TNFSF9P41273 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
TNFSF9P41273 UBE3AP2-201ENST00000429033 2259 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TNFSF9P41273 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TNFSF9P41273 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.16□□□□□ -1.74
TNFSF9P41273 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
TNFSF9P41273 SOD2P1-201ENST00000396543 562 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 PTMAP2-201ENST00000397627 327 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 SNORA3.3-201ENST00000408712 125 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.16□□□□□ -1.74
TNFSF9P41273 AL451062.2-201ENST00000427515 271 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 AC007389.2-201ENST00000434630 306 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 RRM2P4-201ENST00000441721 562 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 APOOP2-201ENST00000461561 539 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.16□□□□□ -1.74
TNFSF9P41273 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 RAC1P2-201ENST00000511164 579 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 RNA5SP208-201ENST00000516156 78 ntBASIC4.16□□□□□ -1.74
TNFSF9P41273 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.16□□□□□ -1.74
TNFSF9P41273 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.16□□□□□ -1.74
TNFSF9P41273 AL008729.2-201ENST00000606393 473 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms