Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MTCYBP21-201ENST00000443300 1113 ntBASIC4.04□□□□□ -1.76
RORAP35398 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 PCNAP1-201ENST00000505363 709 ntBASIC4.04□□□□□ -1.76
RORAP35398 AC093824.1-201ENST00000508796 343 ntBASIC4.04□□□□□ -1.76
RORAP35398 AC026402.1-201ENST00000513642 170 ntBASIC4.04□□□□□ -1.76
RORAP35398 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.04□□□□□ -1.76
RORAP35398 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.04□□□□□ -1.76
RORAP35398 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 AC005021.1-201ENST00000608730 355 ntBASIC4.04□□□□□ -1.76
RORAP35398 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.04□□□□□ -1.76
RORAP35398 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RORAP35398 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RORAP35398 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.03□□□□□ -1.76
RORAP35398 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 SPRR2C-201ENST00000290702 219 ntBASIC4.03□□□□□ -1.76
RORAP35398 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RORAP35398 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 GSTA12P-201ENST00000402398 508 ntBASIC4.03□□□□□ -1.76
RORAP35398 PPIAP31-201ENST00000405422 495 ntBASIC4.03□□□□□ -1.76
RORAP35398 RN7SKP182-201ENST00000410772 298 ntBASIC4.03□□□□□ -1.76
RORAP35398 MIR1911-201ENST00000410783 80 ntBASIC4.03□□□□□ -1.76
RORAP35398 RN7SKP167-201ENST00000411047 285 ntBASIC4.03□□□□□ -1.76
RORAP35398 RNA5SP39-201ENST00000411245 120 ntBASIC4.03□□□□□ -1.76
RORAP35398 OR8G2P-201ENST00000412796 908 ntBASIC4.03□□□□□ -1.76
RORAP35398 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.03□□□□□ -1.76
RORAP35398 AL356095.1-201ENST00000417217 199 ntBASIC4.03□□□□□ -1.76
RORAP35398 YWHAEP5-201ENST00000431545 765 ntBASIC4.03□□□□□ -1.76
RORAP35398 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.03□□□□□ -1.76
RORAP35398 RNU6-775P-201ENST00000459318 96 ntBASIC4.03□□□□□ -1.76
RORAP35398 RPL21P71-201ENST00000465598 459 ntBASIC4.03□□□□□ -1.76
RORAP35398 RPL7P22-201ENST00000466005 733 ntBASIC4.03□□□□□ -1.76
RORAP35398 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.03□□□□□ -1.76
RORAP35398 AC023050.1-201ENST00000498198 304 ntBASIC4.03□□□□□ -1.76
RORAP35398 HNRNPKP5-201ENST00000515300 253 ntBASIC4.03□□□□□ -1.76
RORAP35398 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.03□□□□□ -1.76
RORAP35398 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.03□□□□□ -1.76
RORAP35398 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.03□□□□□ -1.76
RORAP35398 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.03□□□□□ -1.76
RORAP35398 AC100770.1-201ENST00000532310 322 ntBASIC4.03□□□□□ -1.76
RORAP35398 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 AC007424.1-203ENST00000554613 687 ntBASIC4.03□□□□□ -1.76
RORAP35398 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.03□□□□□ -1.76
RORAP35398 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.03□□□□□ -1.76
RORAP35398 AL109618.2-201ENST00000605527 211 ntBASIC4.03□□□□□ -1.76
RORAP35398 AC008013.2-202ENST00000637965 364 ntBASIC4.03□□□□□ -1.76
RORAP35398 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.03□□□□□ -1.76
RORAP35398 AC093311.1-201ENST00000506586 2021 ntBASIC4.03□□□□□ -1.76
RORAP35398 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RORAP35398 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RORAP35398 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RORAP35398 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
RORAP35398 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
RORAP35398 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 MTCO1P14-201ENST00000441695 1559 ntBASIC4.02□□□□□ -1.77
RORAP35398 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
RORAP35398 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.02□□□□□ -1.77
RORAP35398 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
RORAP35398 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.02□□□□□ -1.77
RORAP35398 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.02□□□□□ -1.77
RORAP35398 RBMY1KP-201ENST00000423480 476 ntBASIC4.02□□□□□ -1.77
RORAP35398 RNF19BPX-201ENST00000426224 625 ntBASIC4.02□□□□□ -1.77
RORAP35398 AC073335.1-201ENST00000427776 363 ntBASIC4.02□□□□□ -1.77
RORAP35398 MRPL50P1-201ENST00000431951 384 ntBASIC4.02□□□□□ -1.77
RORAP35398 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.02□□□□□ -1.77
RORAP35398 KCTD10P1-201ENST00000434203 625 ntBASIC4.02□□□□□ -1.77
RORAP35398 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.02□□□□□ -1.77
RORAP35398 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.02□□□□□ -1.77
RORAP35398 SNRPGP5-201ENST00000456003 220 ntBASIC4.02□□□□□ -1.77
RORAP35398 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.02□□□□□ -1.77
RORAP35398 AC021146.7-201ENST00000509604 775 ntBASIC4.02□□□□□ -1.77
RORAP35398 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
RORAP35398 AC006064.5-201ENST00000541782 248 ntBASIC4.02□□□□□ -1.77
RORAP35398 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.02□□□□□ -1.77
RORAP35398 OR8R1P-201ENST00000543943 764 ntBASIC4.02□□□□□ -1.77
RORAP35398 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.02□□□□□ -1.77
RORAP35398 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.02□□□□□ -1.77
RORAP35398 MTATP6P25-201ENST00000574491 261 ntBASIC4.02□□□□□ -1.77
RORAP35398 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.02□□□□□ -1.77
RORAP35398 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RORAP35398 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.02□□□□□ -1.77
RORAP35398 AC115621.1-201ENST00000604653 858 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms