Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
RPA3P35244 ATE1-AS1-202ENST00000636460 506 ntBASIC3.91□□□□□ -1.78
RPA3P35244 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
RPA3P35244 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RPA3P35244 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RPA3P35244 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RPA3P35244 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
RPA3P35244 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.9□□□□□ -1.79
RPA3P35244 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPA3P35244 RPL21P65-201ENST00000406094 466 ntBASIC3.9□□□□□ -1.79
RPA3P35244 Z98941.1-201ENST00000407764 100 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.9□□□□□ -1.79
RPA3P35244 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.9□□□□□ -1.79
RPA3P35244 AL356095.1-201ENST00000417217 199 ntBASIC3.9□□□□□ -1.79
RPA3P35244 MTCYBP7-201ENST00000419540 1134 ntBASIC3.9□□□□□ -1.79
RPA3P35244 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC115285.1-201ENST00000424879 736 ntBASIC3.9□□□□□ -1.79
RPA3P35244 HIGD1AP4-201ENST00000430194 280 ntBASIC3.9□□□□□ -1.79
RPA3P35244 RPS20P1-201ENST00000434853 354 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.9□□□□□ -1.79
RPA3P35244 AL356276.2-201ENST00000435919 558 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC009263.1-201ENST00000441193 1239 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AL357520.1-201ENST00000441557 453 ntBASIC3.9□□□□□ -1.79
RPA3P35244 RANP8-201ENST00000444720 713 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.9□□□□□ -1.79
RPA3P35244 AC239809.1-201ENST00000450470 217 ntBASIC3.9□□□□□ -1.79
RPA3P35244 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.9□□□□□ -1.79
RPA3P35244 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.9□□□□□ -1.79
RPA3P35244 AL354710.1-201ENST00000453641 246 ntBASIC3.9□□□□□ -1.79
RPA3P35244 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.9□□□□□ -1.79
RPA3P35244 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
RPA3P35244 AC110792.1-201ENST00000491826 472 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AL133372.1-201ENST00000493565 745 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.9□□□□□ -1.79
RPA3P35244 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPA3P35244 RN7SKP83-201ENST00000516512 178 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AF186190.1-201ENST00000517470 480 ntBASIC3.9□□□□□ -1.79
RPA3P35244 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RPA3P35244 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPA3P35244 AL121576.1-201ENST00000556055 276 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.9□□□□□ -1.79
RPA3P35244 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.9□□□□□ -1.79
RPA3P35244 AC110743.1-201ENST00000584870 478 ntBASIC3.9□□□□□ -1.79
RPA3P35244 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.9□□□□□ -1.79
RPA3P35244 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.9□□□□□ -1.79
RPA3P35244 AC123786.2-201ENST00000603459 275 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC020910.2-201ENST00000603635 610 ntBASIC3.9□□□□□ -1.79
RPA3P35244 AC012213.4-201ENST00000606457 354 ntBASIC3.9□□□□□ -1.79
RPA3P35244 MIR6867-201ENST00000610636 67 ntBASIC3.9□□□□□ -1.79
RPA3P35244 MIR6868-201ENST00000611215 58 ntBASIC3.9□□□□□ -1.79
RPA3P35244 CASC19-261ENST00000641853 1638 ntBASIC3.9□□□□□ -1.79
RPA3P35244 RLIMP1-201ENST00000339626 1680 ntBASIC3.9□□□□□ -1.79
RPA3P35244 RPS4XP5-202ENST00000449995 1334 ntBASIC3.9□□□□□ -1.79
RPA3P35244 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPA3P35244 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.9□□□□□ -1.79
RPA3P35244 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 MTND4P10-201ENST00000446199 1363 ntBASIC3.89□□□□□ -1.79
RPA3P35244 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.89□□□□□ -1.79
RPA3P35244 SPRR2C-201ENST00000290702 219 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 AL034403.1-201ENST00000399414 885 ntBASIC3.89□□□□□ -1.79
RPA3P35244 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.89□□□□□ -1.79
RPA3P35244 RNU4-6P-201ENST00000410804 122 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.89□□□□□ -1.79
RPA3P35244 AL691449.1-201ENST00000426570 421 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AL158073.1-201ENST00000426848 1104 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.89□□□□□ -1.79
RPA3P35244 AC091390.1-201ENST00000433904 331 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AC093716.1-201ENST00000435923 377 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AC006326.1-201ENST00000445465 787 ntBASIC3.89□□□□□ -1.79
RPA3P35244 RPS11P1-201ENST00000451072 473 ntBASIC3.89□□□□□ -1.79
RPA3P35244 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.89□□□□□ -1.79
RPA3P35244 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.89□□□□□ -1.79
RPA3P35244 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 AGGF1P6-201ENST00000569213 976 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.89□□□□□ -1.79
RPA3P35244 AC010200.2-201ENST00000605098 235 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AC034236.3-201ENST00000605999 461 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AC007620.3-201ENST00000608131 497 ntBASIC3.89□□□□□ -1.79
RPA3P35244 AC019131.2-201ENST00000609071 870 ntBASIC3.89□□□□□ -1.79
RPA3P35244 ZYXP1-201ENST00000617638 118 ntBASIC3.89□□□□□ -1.79
RPA3P35244 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RPA3P35244 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPA3P35244 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RPA3P35244 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.88□□□□□ -1.79
RPA3P35244 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RPA3P35244 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.88□□□□□ -1.79
RPA3P35244 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms