Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.35□□□□□ -1.71
COL4A5P29400 UBE2V1P1-201ENST00000430836 445 ntBASIC4.35□□□□□ -1.71
COL4A5P29400 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.35□□□□□ -1.71
COL4A5P29400 RPL21P13-201ENST00000488305 481 ntBASIC4.35□□□□□ -1.71
COL4A5P29400 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.35□□□□□ -1.71
COL4A5P29400 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL4A5P29400 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
COL4A5P29400 MIR3936-201ENST00000584304 110 ntBASIC4.35□□□□□ -1.71
COL4A5P29400 AL606834.2-201ENST00000602954 668 ntBASIC4.35□□□□□ -1.71
COL4A5P29400 AC004944.1-201ENST00000517807 3059 ntBASIC4.35□□□□□ -1.71
COL4A5P29400 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
COL4A5P29400 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A5P29400 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL4A5P29400 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
COL4A5P29400 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 AC093719.1-202ENST00000392735 373 ntBASIC4.34□□□□□ -1.71
COL4A5P29400 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.34□□□□□ -1.71
COL4A5P29400 UBA52P6-201ENST00000399822 382 ntBASIC4.34□□□□□ -1.71
COL4A5P29400 RPF2P1-201ENST00000424137 906 ntBASIC4.34□□□□□ -1.71
COL4A5P29400 SDCBPP2-201ENST00000424643 885 ntBASIC4.34□□□□□ -1.71
COL4A5P29400 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A5P29400 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.34□□□□□ -1.71
COL4A5P29400 U3.44-201ENST00000458938 192 ntBASIC4.34□□□□□ -1.71
COL4A5P29400 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL4A5P29400 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.34□□□□□ -1.71
COL4A5P29400 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.34□□□□□ -1.71
COL4A5P29400 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL4A5P29400 MUC2-202ENST00000613187 4845 ntBASIC4.34□□□□□ -1.72
COL4A5P29400 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL4A5P29400 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL4A5P29400 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A5P29400 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COL4A5P29400 HCFC2P1-201ENST00000392864 1592 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COL4A5P29400 U3.26-201ENST00000391236 204 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.33□□□□□ -1.72
COL4A5P29400 NDUFB1P1-201ENST00000435191 180 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 AL831737.1-201ENST00000441288 271 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 RNA5SP103-201ENST00000459503 118 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 AC073522.1-201ENST00000483312 377 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A5P29400 KC877982.1-201ENST00000602313 470 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 AC069209.1-201ENST00000619282 651 ntBASIC4.33□□□□□ -1.72
COL4A5P29400 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL4A5P29400 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
COL4A5P29400 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COL4A5P29400 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL4A5P29400 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.33□□□□□ -1.72
COL4A5P29400 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.33□□□□□ -1.72
COL4A5P29400 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL4A5P29400 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL4A5P29400 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
COL4A5P29400 RPL23AP57-201ENST00000332361 466 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 SNORA38.1-201ENST00000364172 131 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 DYNLL1P7-201ENST00000429273 258 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 AC020893.1-201ENST00000502452 580 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 AC017037.1-201ENST00000508460 471 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 AC026422.1-201ENST00000623961 452 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL4A5P29400 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL4A5P29400 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.32□□□□□ -1.72
COL4A5P29400 NCOA4P2-201ENST00000340589 1813 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.32□□□□□ -1.72
COL4A5P29400 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL4A5P29400 HDGFP1-201ENST00000405943 252 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 RPS15AP29-201ENST00000445539 400 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 AC080014.1-201ENST00000496877 1201 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.32□□□□□ -1.72
COL4A5P29400 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.32□□□□□ -1.72
COL4A5P29400 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.32□□□□□ -1.72
COL4A5P29400 TRAV15-201ENST00000556680 249 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 AP005205.1-201ENST00000563503 508 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 MIR5004-201ENST00000579078 107 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.32□□□□□ -1.72
COL4A5P29400 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL4A5P29400 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL4A5P29400 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
COL4A5P29400 MAPK10-253ENST00000641010 4072 ntBASIC4.31□□□□□ -1.72
COL4A5P29400 RN7SKP53-201ENST00000411337 315 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms