Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 RPL21P132-201ENST00000331267 462 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RNVU1-3-201ENST00000364313 161 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RNU6-356P-201ENST00000384140 107 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC005042.1-201ENST00000393397 800 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC096921.1-201ENST00000411661 375 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 SETP15-201ENST00000412724 337 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 RPL23AP39-201ENST00000415533 405 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AL513325.1-201ENST00000417716 1034 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC083875.1-201ENST00000419509 405 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 OR6C64P-201ENST00000419708 825 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC093698.1-201ENST00000423843 571 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RIMKLBP2-201ENST00000424737 654 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 SNRPEP7-201ENST00000438350 220 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL358876.1-201ENST00000453364 1075 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC010468.1-201ENST00000461022 817 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC072039.1-201ENST00000477611 581 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC090686.1-201ENST00000481577 749 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 FAM172BP-201ENST00000487497 1089 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RN7SL466P-201ENST00000497546 295 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC005178.1-201ENST00000508392 440 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC106872.4-201ENST00000510050 523 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RNU6-759P-201ENST00000516740 103 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC090819.1-201ENST00000523800 1111 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 OR8Q1P-201ENST00000526467 655 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.74□□□□□ -1.65
TNFSF4P23510 HMGB2P1-201ENST00000591146 634 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC104695.2-201ENST00000605056 775 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RNA5SP440-201ENST00000612665 119 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC090116.1-201ENST00000615679 446 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AC025588.4-201ENST00000615802 908 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AF246928.1-201ENST00000623768 87 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 AL049767.1-202ENST00000637826 242 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 PCAT14-202ENST00000627127 3935 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.74□□□□□ -1.65
TNFSF4P23510 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TNFSF4P23510 AL359893.1-201ENST00000447628 1580 ntBASIC4.74□□□□□ -1.65
TNFSF4P23510 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TNFSF4P23510 AC026951.1-201ENST00000559530 2459 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.73□□□□□ -1.65
TNFSF4P23510 MAPK10-328ENST00000641553 4009 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TNFSF4P23510 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 SCARNA15-201ENST00000607520 4325 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.73□□□□□ -1.65
TNFSF4P23510 AP001273.1-201ENST00000624493 3152 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.73□□□□□ -1.65
TNFSF4P23510 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
TNFSF4P23510 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TNFSF4P23510 GAPDHP24-201ENST00000328713 983 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 SNORD82-201ENST00000365530 70 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 RNU6-730P-201ENST00000383954 104 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 AC092642.1-201ENST00000392417 425 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 AC136624.1-201ENST00000400791 413 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 AL121972.1-201ENST00000402023 252 ntBASIC4.73□□□□□ -1.65
TNFSF4P23510 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.73□□□□□ -1.65
TNFSF4P23510 AC012065.2-201ENST00000421295 375 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms