Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 MIR193BHG-214ENST00000641765 509 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 OR5H6-203ENST00000642105 978 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL6A2P12110 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
COL6A2P12110 AC068870.1-201ENST00000563737 2455 ntBASIC5.54□□□□□ -1.52
COL6A2P12110 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
COL6A2P12110 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL6A2P12110 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 RNU5E-5P-201ENST00000365379 116 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 RPL17P50-201ENST00000396131 546 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 MIR1282-201ENST00000408865 101 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC083875.1-201ENST00000419509 405 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 OFD1P18Y-201ENST00000420889 959 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC233981.1-201ENST00000423224 461 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 VDAC1P6-201ENST00000430062 855 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 CNOT7P2-201ENST00000441051 832 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC004865.1-201ENST00000442276 1003 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 RPS10P18-201ENST00000442662 495 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 VN1R34P-201ENST00000447387 883 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 WASF1P1-201ENST00000447560 1131 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 PDSS1P2-201ENST00000449397 678 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 NDUFA5P7-201ENST00000452914 242 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 RPL31P58-201ENST00000469001 379 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 EIF3LP3-201ENST00000495197 822 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 FCF1P3-201ENST00000496394 590 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.53□□□□□ -1.52
COL6A2P12110 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC011411.1-201ENST00000509592 876 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC091133.4-201ENST00000511142 308 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC118273.2-201ENST00000532092 465 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC006512.2-201ENST00000543250 486 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 OR6C73P-201ENST00000546432 358 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 AC112187.2-201ENST00000604345 283 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AC010857.1-201ENST00000606398 594 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AL159169.3-201ENST00000608871 561 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 AC091834.1-201ENST00000614543 472 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 AL121890.2-201ENST00000617644 465 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.53□□□□□ -1.52
COL6A2P12110 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.53□□□□□ -1.52
COL6A2P12110 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 MTND4P16-201ENST00000466108 1367 ntBASIC5.53□□□□□ -1.52
COL6A2P12110 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.53□□□□□ -1.52
COL6A2P12110 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL6A2P12110 LINC01963-201ENST00000562038 3148 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.52□□□□□ -1.53
COL6A2P12110 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
COL6A2P12110 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
COL6A2P12110 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL6A2P12110 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL6A2P12110 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL6A2P12110 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL6A2P12110 RN7SKP226-201ENST00000364912 300 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 RNU6-297P-201ENST00000384636 107 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 SNORA48.4-201ENST00000391089 134 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms