Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 RNU5E-4P-201ENST00000364931 120 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A1P12109 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.85□□□□□ -1.47
COL6A1P12109 AL450263.2-201ENST00000439400 589 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 RPL36AP15-201ENST00000444514 266 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A1P12109 AC005229.2-201ENST00000456995 399 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 PSAT1P4-201ENST00000466500 526 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC092754.1-201ENST00000472975 479 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 RPL23AP37-201ENST00000479658 549 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AL024509.2-201ENST00000493462 493 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 AC140172.1-201ENST00000502928 141 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC112198.1-201ENST00000505369 1220 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC079140.3-201ENST00000511111 550 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A1P12109 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 AC106038.2-201ENST00000520706 568 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL6A1P12109 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.85□□□□□ -1.47
COL6A1P12109 PARP1P2-201ENST00000556806 195 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.85□□□□□ -1.47
COL6A1P12109 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 AC009962.1-201ENST00000567327 3813 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC012435.1-202ENST00000568772 240 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.85□□□□□ -1.47
COL6A1P12109 MIR3912-201ENST00000577566 105 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 RN7SL356P-201ENST00000582228 248 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 BNIP3P26-201ENST00000600827 554 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 WISP1-OT1-201ENST00000602893 642 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 AC011451.2-201ENST00000604303 598 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 MEMO1P5-201ENST00000604810 406 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 MFSD8-245ENST00000641743 948 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL6A1P12109 AC093311.1-201ENST00000506586 2021 ntBASIC5.85□□□□□ -1.47
COL6A1P12109 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL6A1P12109 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.85□□□□□ -1.47
COL6A1P12109 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL6A1P12109 AL034370.1-201ENST00000397254 1590 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.84□□□□□ -1.47
COL6A1P12109 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
COL6A1P12109 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A1P12109 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL6A1P12109 AL672167.1-206ENST00000356293 943 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 U3.4-201ENST00000363352 213 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 RNU6-931P-201ENST00000363850 107 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 RNA5SP428-201ENST00000365129 132 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 RNA5SP223-201ENST00000365174 120 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 RNU6-317P-201ENST00000384031 107 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 RNU6-1119P-201ENST00000384349 108 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL6A1P12109 AC010385.1-201ENST00000412374 256 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AC007899.1-201ENST00000412776 775 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 OR8G2P-201ENST00000412796 908 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AC027644.1-201ENST00000419595 298 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AL022400.1-201ENST00000423946 935 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A1P12109 NPM1P24-201ENST00000428039 894 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A1P12109 RPL5P25-201ENST00000441148 775 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 RPL34P20-201ENST00000442771 351 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL6A1P12109 AC063943.1-201ENST00000465434 453 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 SETP11-201ENST00000473027 690 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 RN7SKP260-201ENST00000516907 149 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.84□□□□□ -1.47
COL6A1P12109 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.84□□□□□ -1.47
COL6A1P12109 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.84□□□□□ -1.47
COL6A1P12109 AC087883.1-201ENST00000551882 391 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL6A1P12109 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL6A1P12109 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.84□□□□□ -1.47
COL6A1P12109 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A1P12109 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.84□□□□□ -1.47
COL6A1P12109 AC006363.1-201ENST00000603806 463 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AC024941.1-201ENST00000612250 334 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AL607023.1-201ENST00000620045 248 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AC068831.8-201ENST00000620171 435 ntBASIC5.84□□□□□ -1.47
COL6A1P12109 AC114774.1-201ENST00000507410 1770 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms