Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.2□□□□□ -1.74
COL11A1P12107 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL11A1P12107 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL11A1P12107 AC068254.2-201ENST00000623938 3577 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL11A1P12107 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.19□□□□□ -1.74
COL11A1P12107 Z75741.1-201ENST00000446793 314 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 BX510359.1-201ENST00000456973 237 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.19□□□□□ -1.74
COL11A1P12107 AC090589.1-201ENST00000473109 362 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
COL11A1P12107 RANP9-201ENST00000519957 271 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.19□□□□□ -1.74
COL11A1P12107 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.19□□□□□ -1.74
COL11A1P12107 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.19□□□□□ -1.74
COL11A1P12107 MIR4433B-201ENST00000581329 102 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.19□□□□□ -1.74
COL11A1P12107 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.19□□□□□ -1.74
COL11A1P12107 AL031985.2-201ENST00000600955 480 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 AF131215.7-201ENST00000602443 707 ntBASIC4.19□□□□□ -1.74
COL11A1P12107 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.19□□□□□ -1.74
COL11A1P12107 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
COL11A1P12107 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.19□□□□□ -1.74
COL11A1P12107 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.19□□□□□ -1.74
COL11A1P12107 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL11A1P12107 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL11A1P12107 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
COL11A1P12107 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL11A1P12107 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.19□□□□□ -1.74
COL11A1P12107 AC017083.1-201ENST00000428093 483 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.18□□□□□ -1.74
COL11A1P12107 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 AC092447.2-201ENST00000435487 669 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AC127537.2-201ENST00000439258 465 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 UBA52P3-201ENST00000491303 382 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.18□□□□□ -1.74
COL11A1P12107 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.18□□□□□ -1.74
COL11A1P12107 OR5AC4P-202ENST00000642086 985 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL11A1P12107 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 LINC01109-201ENST00000603837 3081 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.18□□□□□ -1.74
COL11A1P12107 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
COL11A1P12107 RNU1-33P-201ENST00000364249 162 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 OR52E6-202ENST00000379946 954 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 MIR34B-201ENST00000385076 84 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 RNA5SP424-201ENST00000390988 115 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.18□□□□□ -1.74
COL11A1P12107 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.18□□□□□ -1.74
COL11A1P12107 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.18□□□□□ -1.74
COL11A1P12107 AC098824.1-201ENST00000453565 980 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.18□□□□□ -1.74
COL11A1P12107 AC025518.1-201ENST00000479856 347 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.18□□□□□ -1.74
COL11A1P12107 HMGN2P47-201ENST00000559378 272 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 GTF2IP8-201ENST00000560687 584 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AC090877.1-201ENST00000561418 344 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AC015722.2-201ENST00000622210 551 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 AC091905.1-201ENST00000624400 311 ntBASIC4.18□□□□□ -1.74
COL11A1P12107 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.18□□□□□ -1.74
COL11A1P12107 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
COL11A1P12107 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL11A1P12107 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
COL11A1P12107 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.17□□□□□ -1.74
COL11A1P12107 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL11A1P12107 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 OR2X1P-201ENST00000421144 687 ntBASIC4.17□□□□□ -1.74
COL11A1P12107 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.17□□□□□ -1.74
COL11A1P12107 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.17□□□□□ -1.74
COL11A1P12107 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL11A1P12107 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.17□□□□□ -1.74
COL11A1P12107 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.17□□□□□ -1.74
COL11A1P12107 AC097504.1-201ENST00000515103 2415 ntBASIC4.17□□□□□ -1.74
COL11A1P12107 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
COL11A1P12107 MTCO1P12-201ENST00000414273 1543 ntBASIC4.16□□□□□ -1.74
COL11A1P12107 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL11A1P12107 AC073387.1-201ENST00000453261 709 ntBASIC4.16□□□□□ -1.74
COL11A1P12107 RN7SL601P-201ENST00000471221 293 ntBASIC4.16□□□□□ -1.74
COL11A1P12107 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.16□□□□□ -1.74
COL11A1P12107 AC093663.1-201ENST00000497190 394 ntBASIC4.16□□□□□ -1.74
COL11A1P12107 AC139783.2-201ENST00000504847 1145 ntBASIC4.16□□□□□ -1.74
COL11A1P12107 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL11A1P12107 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.16□□□□□ -1.74
COL11A1P12107 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.16□□□□□ -1.74
COL11A1P12107 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL11A1P12107 AC128687.2-201ENST00000609657 566 ntBASIC4.16□□□□□ -1.74
COL11A1P12107 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
COL11A1P12107 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL11A1P12107 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms