Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC022031.1-201ENST00000585985 2593 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 ADAM5-202ENST00000399789 1942 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 AC134882.1-201ENST00000603738 1676 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 OR52B1P-201ENST00000316506 909 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 UBE2V1P15-201ENST00000407776 448 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 RNU2-17P-201ENST00000410290 190 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 AL357078.2-201ENST00000416486 427 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 AL031736.2-201ENST00000426573 787 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFBP01127 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFBP01127 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFBP01127 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFBP01127 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFBP01127 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFBP01127 RPS20P4-201ENST00000461659 355 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 SNORA70.24-201ENST00000517233 118 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 IGKV2-36-201ENST00000519999 223 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFBP01127 DYNLL1P4-201ENST00000549314 266 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFBP01127 VN1R92P-201ENST00000598511 928 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 AC020978.9-201ENST00000624380 1141 ntBASIC4.43□□□□□ -1.7
PDGFBP01127 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDGFBP01127 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFBP01127 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFBP01127 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFBP01127 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFBP01127 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDGFBP01127 RNU1-87P-201ENST00000363727 170 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 SNORA40.4-201ENST00000390971 128 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 RN7SKP235-201ENST00000410662 305 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC010385.1-201ENST00000412374 256 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFBP01127 MTCO3P4-201ENST00000419236 787 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC007000.2-201ENST00000442564 487 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC097499.1-201ENST00000444277 208 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFBP01127 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFBP01127 OR52E3P-201ENST00000452083 936 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 ACTR3P3-201ENST00000480448 893 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC011037.1-201ENST00000483964 558 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFBP01127 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFBP01127 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.42□□□□□ -1.7
PDGFBP01127 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFBP01127 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFBP01127 AL450270.1-201ENST00000606160 391 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 OR2BH1P-201ENST00000608850 864 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC090912.3-201ENST00000609775 533 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 AC000123.2-201ENST00000623124 461 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC010608.2-201ENST00000624830 470 ntBASIC4.42□□□□□ -1.7
PDGFBP01127 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFBP01127 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFBP01127 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFBP01127 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PDGFBP01127 AL445487.1-201ENST00000415694 1580 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PDGFBP01127 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PDGFBP01127 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PDGFBP01127 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDGFBP01127 RNU1-14P-201ENST00000362759 152 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 RNU11-4P-201ENST00000391149 133 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 LINC01347-201ENST00000417964 355 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 AL390879.2-203ENST00000426943 1121 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.41□□□□□ -1.7
PDGFBP01127 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC114495.1-201ENST00000441274 436 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 KCTD9P2-201ENST00000512203 1013 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 SETP12-201ENST00000514068 805 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 AC099522.1-202ENST00000514718 367 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 HAUS1P3-201ENST00000523909 662 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 OR8K2P-201ENST00000524645 927 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms