Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AP003072.4-201ENST00000624580 310 ntBASIC3.99□□□□□ -1.77
CLDN9O95484 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN9O95484 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN9O95484 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CLDN9O95484 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CLDN9O95484 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN9O95484 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN9O95484 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
CLDN9O95484 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLDN9O95484 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 RNA5SP366-201ENST00000365454 123 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 GCNT6-201ENST00000379591 934 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 COX6CP17-201ENST00000421389 185 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC023141.6-201ENST00000429418 337 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 RPS24P8-201ENST00000431490 402 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC006011.1-201ENST00000442758 349 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN9O95484 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN9O95484 RN7SL385P-201ENST00000468873 276 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN9O95484 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN9O95484 RNU7-143P-201ENST00000516781 65 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN9O95484 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN9O95484 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN9O95484 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN9O95484 AC115085.1-201ENST00000588924 229 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AP003117.1-201ENST00000602771 554 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN9O95484 AL445423.1-201ENST00000609941 536 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN9O95484 AL121890.3-201ENST00000618494 516 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC233309.1-201ENST00000619522 751 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC095038.2-201ENST00000621464 1070 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN9O95484 AC000123.2-201ENST00000623124 461 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 AC016588.2-201ENST00000632484 3021 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CLDN9O95484 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN9O95484 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN9O95484 AL118496.1-201ENST00000440201 1812 ntBASIC3.98□□□□□ -1.77
CLDN9O95484 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CLDN9O95484 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN9O95484 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN9O95484 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN9O95484 RNF6P1-201ENST00000444889 1784 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN9O95484 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN9O95484 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN9O95484 CCNB2P1-201ENST00000399411 1150 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 RNA5SP306-201ENST00000411087 107 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 RNU4-74P-201ENST00000411280 161 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC010385.1-201ENST00000412374 256 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 NANOGP6-201ENST00000429190 847 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 MTCO1P54-201ENST00000430139 712 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 TRIM60P13-201ENST00000432350 1283 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 BTF3P10-201ENST00000433415 495 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 MED6P1-201ENST00000439659 713 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 MTND2P8-201ENST00000450555 1025 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 TPMTP4-201ENST00000450749 678 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 RPL7P1-201ENST00000468161 747 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 RPL7P9-201ENST00000468715 747 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC041039.1-201ENST00000485656 536 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN9O95484 RPL29P14-201ENST00000495837 428 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN9O95484 AC025459.1-201ENST00000504072 156 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.97□□□□□ -1.77
CLDN9O95484 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN9O95484 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN9O95484 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.97□□□□□ -1.77
CLDN9O95484 AC090281.1-201ENST00000523019 276 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 TOMM20P2-201ENST00000540082 421 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC079171.1-201ENST00000568788 914 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 MIR4512-201ENST00000583257 77 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AL139395.1-201ENST00000603662 160 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC083809.1-201ENST00000615051 472 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AP000843.1-201ENST00000624880 701 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 CR392039.4-201ENST00000624968 501 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 AC116667.1-201ENST00000604855 2072 ntBASIC3.97□□□□□ -1.77
CLDN9O95484 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN9O95484 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN9O95484 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
CLDN9O95484 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN9O95484 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.97□□□□□ -1.77
CLDN9O95484 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.97□□□□□ -1.77
CLDN9O95484 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CLDN9O95484 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CLDN9O95484 AC007390.2-201ENST00000606229 3803 ntBASIC3.96□□□□□ -1.77
CLDN9O95484 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN9O95484 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN9O95484 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN9O95484 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN9O95484 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN9O95484 AL161909.1-201ENST00000397390 712 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms