Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SETD6P1-201ENST00000444575 317 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 HMGB3P6-201ENST00000444896 598 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 OR6K5P-201ENST00000447050 945 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 SNORA74D-201ENST00000516404 141 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 RNA5SP519-201ENST00000516480 119 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 HIGD1AP18-201ENST00000520730 278 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC006518.2-201ENST00000542513 940 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 SNORA51-201ENST00000606420 132 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AL031658.2-201ENST00000616850 651 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 AL357559.1-201ENST00000622228 274 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC015908.5-201ENST00000623289 343 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 AC026422.1-201ENST00000623961 452 ntBASIC6.67□□□□□ -1.34
RAPGEF3O95398 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RAPGEF3O95398 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RAPGEF3O95398 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RAPGEF3O95398 METTL21EP-201ENST00000298105 713 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RAPGEF3O95398 RNU4-92P-201ENST00000363783 136 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 RAB9AP3-201ENST00000412737 573 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 RPL6P29-201ENST00000414863 865 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AL365338.1-201ENST00000422282 858 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC021876.1-201ENST00000425959 359 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 TCEA1P3-201ENST00000443005 880 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 RAB9AP1-201ENST00000449393 573 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AL035407.2-201ENST00000454090 378 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AL122001.1-201ENST00000457027 370 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC082651.2-201ENST00000496833 166 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC118465.1-201ENST00000513820 1271 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 RNU6-1004P-201ENST00000516584 111 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC061975.8-201ENST00000587058 721 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC021171.1-201ENST00000603137 706 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC013470.4-201ENST00000619978 986 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC005858.4-201ENST00000623191 700 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 OR1S1-201ENST00000624470 978 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RAPGEF3O95398 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.66□□□□□ -1.34
RAPGEF3O95398 AC032011.1-201ENST00000611703 1549 ntBASIC6.66□□□□□ -1.34
RAPGEF3O95398 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 RNU6-729P-201ENST00000384399 107 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 MIR7-3-201ENST00000384898 110 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC097374.1-203ENST00000400783 485 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 U3.35-201ENST00000408405 208 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 RPL23AP4-201ENST00000427757 463 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 HMGB3P10-201ENST00000434734 572 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 EEF1A1P39-201ENST00000440791 250 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC114495.1-201ENST00000441274 436 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC012671.1-201ENST00000451912 203 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC244505.3-201ENST00000454598 187 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 MTCO2P15-201ENST00000532655 656 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 DYNLL1P4-201ENST00000549314 266 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC087477.6-201ENST00000559595 843 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 MIR5685-201ENST00000579080 79 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RAPGEF3O95398 AL354984.3-201ENST00000604803 325 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC084782.3-201ENST00000612282 578 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms