Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC098799.3-201ENST00000506095 438 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC113347.3-201ENST00000509113 148 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC117522.2-201ENST00000510049 657 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC010486.3-201ENST00000511602 785 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC007016.1-201ENST00000512110 244 ntBASIC4.63□□□□□ -1.67
LDB2O43679 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.63□□□□□ -1.67
LDB2O43679 VN1R83P-201ENST00000595685 445 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC124856.1-201ENST00000600819 896 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AL353778.1-201ENST00000603149 408 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC069304.3-201ENST00000603938 1084 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC021749.1-201ENST00000604322 607 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC064807.4-201ENST00000607201 407 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AL451064.1-201ENST00000607718 471 ntBASIC4.63□□□□□ -1.67
LDB2O43679 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.63□□□□□ -1.67
LDB2O43679 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 U6.107-201ENST00000637108 79 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AL391684.1-202ENST00000641293 1636 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC104446.1-201ENST00000613728 1321 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDB2O43679 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 AC104454.1-201ENST00000421341 1401 ntBASIC4.63□□□□□ -1.67
LDB2O43679 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.62□□□□□ -1.67
LDB2O43679 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LDB2O43679 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 RNVU1-6-201ENST00000364688 164 ntBASIC4.62□□□□□ -1.67
LDB2O43679 SNORD96B-201ENST00000386148 79 ntBASIC4.62□□□□□ -1.67
LDB2O43679 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LDB2O43679 ERHP2-201ENST00000402323 299 ntBASIC4.62□□□□□ -1.67
LDB2O43679 RN7SKP222-201ENST00000410651 315 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 OR4K6P-201ENST00000416478 897 ntBASIC4.62□□□□□ -1.67
LDB2O43679 OR6C64P-201ENST00000419708 825 ntBASIC4.62□□□□□ -1.67
LDB2O43679 MTND2P18-201ENST00000419962 1030 ntBASIC4.62□□□□□ -1.67
LDB2O43679 NIPA2P1-201ENST00000426223 976 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.62□□□□□ -1.67
LDB2O43679 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 EXTL2P1-201ENST00000446218 416 ntBASIC4.62□□□□□ -1.67
LDB2O43679 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 AC073264.2-201ENST00000448886 166 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 NPM1P39-201ENST00000449818 867 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AL935212.3-201ENST00000450729 284 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC233982.1-201ENST00000451247 436 ntBASIC4.62□□□□□ -1.67
LDB2O43679 NPM1P13-201ENST00000452663 865 ntBASIC4.62□□□□□ -1.67
LDB2O43679 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.62□□□□□ -1.67
LDB2O43679 RPL7P48-201ENST00000461513 746 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC006967.1-201ENST00000467608 589 ntBASIC4.62□□□□□ -1.67
LDB2O43679 PRDX3P4-201ENST00000470828 747 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC104763.1-201ENST00000475274 360 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 RN7SL459P-201ENST00000481078 302 ntBASIC4.62□□□□□ -1.67
LDB2O43679 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 RNA5SP446-201ENST00000515955 82 ntBASIC4.62□□□□□ -1.67
LDB2O43679 Y_RNA.688-201ENST00000516565 95 ntBASIC4.62□□□□□ -1.67
LDB2O43679 IGKV1-32-201ENST00000519290 311 ntBASIC4.62□□□□□ -1.67
LDB2O43679 OR5AN2P-201ENST00000534535 896 ntBASIC4.62□□□□□ -1.67
LDB2O43679 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.62□□□□□ -1.67
LDB2O43679 AC135279.1-201ENST00000543493 504 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.62□□□□□ -1.67
LDB2O43679 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 AP001542.2-201ENST00000593141 364 ntBASIC4.62□□□□□ -1.67
LDB2O43679 ZNF92P3-201ENST00000596594 954 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AL583856.2-201ENST00000606298 543 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 AC139769.3-201ENST00000618383 175 ntBASIC4.62□□□□□ -1.67
LDB2O43679 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.62□□□□□ -1.67
LDB2O43679 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.62□□□□□ -1.67
LDB2O43679 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 U3.53-201ENST00000628922 216 ntBASIC4.62□□□□□ -1.67
LDB2O43679 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms