Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC013429.2-201ENST00000418798 781 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 AL353597.2-202ENST00000434901 373 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 B3GNT2P1-201ENST00000434960 952 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 AC097262.1-201ENST00000452559 548 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 RPS27AP8-201ENST00000452665 445 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 Z92846.1-201ENST00000456203 268 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 SETP20-201ENST00000457046 852 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 RPL30P6-201ENST00000475925 342 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 RN7SL717P-201ENST00000478343 297 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AC104109.1-201ENST00000498563 436 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 RNA5SP362-201ENST00000516048 118 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 RNU6-678P-201ENST00000516832 109 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.07□□□□□ -1.6
PHGDHO43175 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 AP000811.1-201ENST00000603803 651 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 OR2AS2P-201ENST00000606902 342 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AC116651.1-201ENST00000609724 556 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.07□□□□□ -1.6
PHGDHO43175 AC008083.4-201ENST00000615076 444 ntBASIC5.07□□□□□ -1.6
PHGDHO43175 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PHGDHO43175 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PHGDHO43175 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PHGDHO43175 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.07□□□□□ -1.6
PHGDHO43175 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHGDHO43175 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHGDHO43175 AC083843.2-201ENST00000568248 6253 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC107027.3-201ENST00000565095 3473 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHGDHO43175 MTND4P34-201ENST00000572715 1371 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 CASC19-221ENST00000641309 1382 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHGDHO43175 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHGDHO43175 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 RNU1-85P-201ENST00000364127 164 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 RNA5SP242-201ENST00000364171 118 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHGDHO43175 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHGDHO43175 SNORA2.3-201ENST00000383920 135 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 SNORA67-201ENST00000384423 137 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 Y_RNA.560-201ENST00000384689 102 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 MIR600-201ENST00000385007 98 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 ATP5F1P4-201ENST00000397288 746 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AL021407.1-201ENST00000404531 386 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC007738.1-201ENST00000413892 348 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 AL513325.1-201ENST00000417716 1034 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AL590609.2-201ENST00000421430 368 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.06□□□□□ -1.6
PHGDHO43175 BX119904.4-201ENST00000424402 301 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 COX6CP13-201ENST00000428703 226 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHGDHO43175 ELOCP8-201ENST00000439309 332 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 ELOCP15-201ENST00000442090 332 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC118469.1-201ENST00000442943 488 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 MTND2P19-201ENST00000449129 1012 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 DDX39BP2-208ENST00000453923 258 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 MTCO3P11-201ENST00000455103 774 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.06□□□□□ -1.6
PHGDHO43175 AC023141.9-201ENST00000458734 412 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 AC112206.1-201ENST00000468416 477 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 OR4G11P-201ENST00000492842 939 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.06□□□□□ -1.6
PHGDHO43175 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
PHGDHO43175 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.06□□□□□ -1.6
PHGDHO43175 GTF2F2P1-201ENST00000511083 675 ntBASIC5.06□□□□□ -1.6
PHGDHO43175 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms