Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ABCF2P2-201ENST00000450549 296 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 SYT14P1-201ENST00000481459 721 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC025459.1-201ENST00000504072 156 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 VTA1P2-201ENST00000520205 911 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 CR383656.14-201ENST00000551951 406 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 GLRXP2-201ENST00000555594 321 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC025918.2-201ENST00000558683 763 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC079148.1-201ENST00000565944 819 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 MIR4286-201ENST00000580651 93 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC093227.2-201ENST00000589357 285 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AC022916.3-201ENST00000592961 742 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AL163051.2-201ENST00000618976 735 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 AP002371.2-201ENST00000624450 503 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD8-MDP1E9PL57 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.28□□□□□ -1.73
NEDD8-MDP1E9PL57 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 RAD1P1-201ENST00000231383 813 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 MIR708-201ENST00000390708 88 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AL445189.1-201ENST00000405722 338 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AP000357.1-201ENST00000409926 1165 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 RN7SKP222-201ENST00000410651 315 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 UBTFL3-201ENST00000418934 1024 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AL121882.1-201ENST00000422893 417 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 RPL23AP23-201ENST00000452590 471 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC078857.1-201ENST00000469870 667 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 UBTFL6-201ENST00000477929 1024 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 PHBP17-201ENST00000528576 541 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC106785.3-201ENST00000564064 847 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 SUMO2P14-201ENST00000604488 293 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC005014.3-201ENST00000605985 190 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AP001033.2-201ENST00000609701 1003 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC009237.17-201ENST00000618111 748 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC095038.2-201ENST00000621464 1070 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC103798.2-201ENST00000624292 632 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEDD8-MDP1E9PL57 AC116667.1-201ENST00000604855 2072 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 TPT1P2-201ENST00000413105 503 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 EIF4EP1-201ENST00000422311 642 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 IPMKP1-201ENST00000425988 855 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 UBE2V1P6-201ENST00000430840 422 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 RNFT1P2-201ENST00000443064 757 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 RPL38P1-201ENST00000460914 211 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC108145.1-201ENST00000503770 153 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms