Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RNU11-4P-201ENST00000391149 133 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 ENSAP1-201ENST00000392855 326 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AMZ2P2-201ENST00000406819 1057 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 MRPL50P1-201ENST00000431951 384 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RAB9AP5-201ENST00000437794 597 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RPS4XP4-201ENST00000443195 763 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RAB9AP2-201ENST00000443911 597 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC092691.2-201ENST00000461787 803 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 MTND6P6-201ENST00000478031 263 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RPL31P61-201ENST00000496160 376 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 SNORA70.14-201ENST00000516205 110 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RNA5SP309-201ENST00000516670 106 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 SMARCE1P4-201ENST00000523647 241 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC007599.1-201ENST00000568688 1174 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 MIR3939-201ENST00000582614 106 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 EIF1P6-201ENST00000600054 334 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC005962.2-201ENST00000611427 652 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AL391261.4-201ENST00000616012 481 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC006338.2-201ENST00000616864 791 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DRB4X5D2U9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 OR10AB1P-202ENST00000641219 1686 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC090229.1-201ENST00000590983 1609 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 IPO8P1-201ENST00000455509 3109 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 SNORA37-201ENST00000384504 129 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 RPS27AP11-201ENST00000402798 447 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 HSPE1P12-201ENST00000412576 301 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 OR5BE1P-201ENST00000425977 939 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AL358472.1-201ENST00000431295 329 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 H2AFZP6-201ENST00000444403 394 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC087385.1-201ENST00000475062 312 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 IGBP1P5-201ENST00000507524 1000 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 KRT19P6-201ENST00000510983 209 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 SNORA31.9-201ENST00000516429 84 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 OR7E10P-201ENST00000526420 991 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 CYCSP29-201ENST00000533731 318 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 OR8X1P-201ENST00000534542 869 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC068714.1-201ENST00000559623 800 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 FAM106CP-201ENST00000582212 507 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 VN1R84P-201ENST00000593697 235 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 MIR6748-201ENST00000610433 71 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 AC023043.4-201ENST00000612081 449 ntBASIC3.01□□□□□ -1.93
HLA-DRB4X5D2U9 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms