Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 ARF4P1-201ENST00000605447 541 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC080188.3-201ENST00000624842 748 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR3653-201ENST00000625572 110 ntBASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA1Q9Y5H4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RNA5SP366-201ENST00000365454 123 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RNU6-796P-201ENST00000391086 107 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC025750.1-201ENST00000399891 379 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC004022.2-201ENST00000413824 193 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AL158825.1-201ENST00000414735 521 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC013429.2-201ENST00000418798 781 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 BMS1P19-201ENST00000433925 393 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC096992.1-201ENST00000459808 709 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC104108.1-201ENST00000509930 412 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 OR5H4P-201ENST00000510851 923 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RNA5SP497-201ENST00000516081 97 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RN7SKP283-201ENST00000517197 270 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 CYCSP29-201ENST00000533731 318 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC027455.1-201ENST00000574104 594 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR3908-201ENST00000579798 126 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 EIF1P6-201ENST00000600054 334 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC020978.9-201ENST00000624380 1141 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC008785.1-201ENST00000624475 456 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR492-201ENST00000638676 116 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 MTCO1P4-201ENST00000520516 1409 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 AC009643.2-201ENST00000603543 1448 ntBASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA1Q9Y5H4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 NSRP1P1-201ENST00000444067 1693 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL121657.1-201ENST00000327215 531 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 RNA5SP27-201ENST00000363839 119 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 MTATP6P31-201ENST00000406985 692 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 RNU2-6P-201ENST00000411404 190 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL23AP26-201ENST00000412728 464 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 TMSB10P2-201ENST00000416049 131 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL606495.1-201ENST00000422100 813 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 RPS12P5-201ENST00000423449 371 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 HSFY6P-201ENST00000445573 403 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC068135.1-201ENST00000446164 246 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 MTCO2P9-201ENST00000503214 694 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC138938.1-201ENST00000515431 782 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL23AP53-201ENST00000521854 457 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 MED28P5-201ENST00000528254 438 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC104229.1-201ENST00000561364 255 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AGGF1P9-201ENST00000561884 913 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms