Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC097713.2-201ENST00000430199 356 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 RN7SL809P-201ENST00000482040 297 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AP000255.1-201ENST00000610276 676 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AL591424.2-201ENST00000617023 128 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 ATE1-AS1-202ENST00000636460 506 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC119674.1-207ENST00000641355 633 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AL603766.1-201ENST00000407763 664 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC092641.1-201ENST00000440229 772 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 TPTE2P3-201ENST00000441562 1189 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 VN1R25P-201ENST00000443385 738 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 RPL21P23-201ENST00000446654 460 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 VN1R40P-201ENST00000455196 941 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 RPS27AP1-201ENST00000475545 471 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC012123.2-201ENST00000485809 248 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 MIR8057-201ENST00000620957 69 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC243312.2-201ENST00000623340 601 ntBASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.63□□□□□ -1.51
SHANK2Q9UPX8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 RNA5SP432-201ENST00000362480 116 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 U3.26-201ENST00000391236 204 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 RPL37P3-201ENST00000456825 293 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 RPL23AP12-201ENST00000467573 473 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 STMN1P2-201ENST00000508435 439 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 TCP11X3P-202ENST00000514289 1254 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AL049840.6-202ENST00000603373 279 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AC128687.2-201ENST00000609657 566 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 AL392088.2-201ENST00000637607 285 ntBASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHANK2Q9UPX8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 DPY19L1P2-201ENST00000426647 915 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 KCTD9P3-201ENST00000434597 1169 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 SNORA71B-202ENST00000439232 272 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 HIGD1AP18-201ENST00000520730 278 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 AP005262.1-201ENST00000582646 997 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 OR7M1P-201ENST00000608946 533 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 MIR8058-201ENST00000615737 89 ntBASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHANK2Q9UPX8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 SNORD9-201ENST00000362566 104 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 MTCO1P45-201ENST00000431457 267 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 SNORD105B-201ENST00000458770 79 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 RN7SL429P-201ENST00000479090 223 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 RN7SL489P-201ENST00000486185 223 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 RN7SL327P-201ENST00000488659 223 ntBASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.6□□□□□ -1.51
SHANK2Q9UPX8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms