Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4□□□□□ -1.77
CISHQ9NSE2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4□□□□□ -1.77
CISHQ9NSE2 HMGB3P5-201ENST00000428894 612 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4□□□□□ -1.77
CISHQ9NSE2 AF228730.2-201ENST00000438784 848 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 NANOGP10-201ENST00000453325 895 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AL133162.1-201ENST00000463228 453 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4□□□□□ -1.77
CISHQ9NSE2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4□□□□□ -1.77
CISHQ9NSE2 AF186190.1-201ENST00000517470 480 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AC006960.3-201ENST00000561845 705 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 MIR486-1-201ENST00000612171 68 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 AP002967.1-201ENST00000624203 539 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4□□□□□ -1.77
CISHQ9NSE2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CISHQ9NSE2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4□□□□□ -1.77
CISHQ9NSE2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4□□□□□ -1.77
CISHQ9NSE2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4□□□□□ -1.77
CISHQ9NSE2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4□□□□□ -1.77
CISHQ9NSE2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CISHQ9NSE2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 HMGN2P8-201ENST00000391458 268 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CISHQ9NSE2 SNORA57.3-201ENST00000411095 141 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 TCEA1P2-201ENST00000420496 906 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 MTND4LP12-201ENST00000448237 295 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 AC091959.2-201ENST00000477363 321 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 AC007991.1-201ENST00000522680 631 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 AL360157.1-201ENST00000565962 87 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 RNU1-30P-201ENST00000606575 163 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.99□□□□□ -1.77
CISHQ9NSE2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CISHQ9NSE2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.99□□□□□ -1.77
CISHQ9NSE2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CISHQ9NSE2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CISHQ9NSE2 MAPK10-373ENST00000641983 6772 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 U8.11-201ENST00000384699 133 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 U8.12-201ENST00000384701 133 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 HSPE1P8-201ENST00000406997 288 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AL590609.2-201ENST00000421430 368 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 IFNNP1-201ENST00000429219 553 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 NPM1P48-201ENST00000436002 853 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC104306.1-201ENST00000449702 371 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 DNAJC19P1-201ENST00000455312 319 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 U8.18-201ENST00000459285 133 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 RPL23AP71-201ENST00000470966 469 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC022034.3-201ENST00000471393 478 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC020898.1-201ENST00000474167 787 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC007688.1-201ENST00000475592 759 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 RN7SKP209-201ENST00000516888 304 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 OR7E13P-201ENST00000526052 910 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC092747.2-201ENST00000545069 983 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AC020978.9-201ENST00000624380 1141 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CISHQ9NSE2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 MTCO1P22-201ENST00000604619 1360 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CISHQ9NSE2 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.98□□□□□ -1.77
CISHQ9NSE2 NCAPGP1-201ENST00000505112 1814 ntBASIC3.98□□□□□ -1.77
CISHQ9NSE2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CISHQ9NSE2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 RNU6-1263P-201ENST00000384601 106 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 ATP5F1P4-201ENST00000397288 746 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 RPL7P60-201ENST00000397636 735 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 RN7SKP159-201ENST00000410657 292 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 CYCSP19-201ENST00000411715 316 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms