Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM55Q9BYV6 AP001029.2-203ENST00000589795 4910 ntBASIC5.84□□□□□ -1.47
TRIM55Q9BYV6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
TRIM55Q9BYV6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
TRIM55Q9BYV6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM55Q9BYV6 STX3-208ENST00000641815 3236 ntBASIC5.84□□□□□ -1.48
TRIM55Q9BYV6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP273-201ENST00000362484 113 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RN7SKP145-201ENST00000363291 303 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNU5E-5P-201ENST00000365379 116 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP211-201ENST00000365516 117 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNU6-146P-201ENST00000384602 108 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC136624.1-201ENST00000400791 413 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 MIR320C1-201ENST00000408566 88 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNU2-66P-201ENST00000410650 161 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 OR8G2P-201ENST00000412796 908 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 ELOCP17-201ENST00000414751 326 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 NUP35P2-201ENST00000416748 943 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 OFD1P18Y-201ENST00000420889 959 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC079355.1-201ENST00000421770 223 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 MTND6P12-201ENST00000428247 522 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RPL31P15-201ENST00000449770 338 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 FAM172BP-201ENST00000487497 1089 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC106872.3-201ENST00000495104 446 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC114781.3-201ENST00000512083 142 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC104057.1-201ENST00000515547 497 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNU6-941P-201ENST00000516346 108 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP271-201ENST00000516700 88 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AP003392.2-201ENST00000527269 208 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AP002453.2-201ENST00000533503 320 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC007956.1-201ENST00000555623 542 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC245505.1-201ENST00000556398 224 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AP003465.2-201ENST00000602571 373 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 SEPT7P9-203ENST00000604116 343 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC109309.2-201ENST00000612597 332 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC093591.3-201ENST00000634516 308 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AC007529.1-201ENST00000418574 2178 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
TRIM55Q9BYV6 AL022578.1-201ENST00000439330 1433 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 AC008627.1-201ENST00000517511 1704 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 AC092447.7-201ENST00000422212 1621 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 OR9G4-201ENST00000302957 984 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RPL23AP57-201ENST00000332361 466 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 Y_RNA.41-201ENST00000362646 102 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RNU6-1243P-201ENST00000364028 107 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RNU6-289P-201ENST00000364093 107 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RNU6-517P-201ENST00000384362 110 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RNA5SP187-201ENST00000384400 119 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RNU6-178P-201ENST00000384631 104 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RNU6-952P-201ENST00000391164 108 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 RN7SKP266-201ENST00000410232 287 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 AC073136.2-201ENST00000417282 849 ntBASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM55Q9BYV6 AC130360.1-201ENST00000425489 1117 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms