Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SSX3Q99909 AC099654.2-201ENST00000433031 1980 ntBASIC4.02□□□□□ -1.77
SSX3Q99909 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX3Q99909 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.01□□□□□ -1.77
SSX3Q99909 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSX3Q99909 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX3Q99909 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC008725.1-201ENST00000605123 2263 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SSX3Q99909 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSX3Q99909 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSX3Q99909 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX3Q99909 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX3Q99909 U6.112-201ENST00000384129 70 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 SNORD96B-201ENST00000386148 79 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 SNORD65C-201ENST00000390962 71 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 RPL37P18-201ENST00000411602 243 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX3Q99909 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC013262.1-201ENST00000426710 252 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AL049745.1-201ENST00000433953 286 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX3Q99909 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC004865.1-201ENST00000442276 1003 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 Z80107.2-201ENST00000445127 392 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC044797.1-201ENST00000445744 679 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 BX276092.4-201ENST00000452056 248 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 SNRPGP5-201ENST00000456003 220 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX3Q99909 MTND2P39-201ENST00000457230 764 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX3Q99909 RN7SL817P-201ENST00000480777 288 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 RN7SL441P-201ENST00000492388 296 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 HPRT1P2-201ENST00000505250 544 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX3Q99909 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX3Q99909 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX3Q99909 AP003102.1-201ENST00000525638 661 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC087894.1-201ENST00000538359 518 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX3Q99909 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX3Q99909 SERPINE4P-201ENST00000554978 281 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC009117.1-201ENST00000563948 554 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC023824.3-201ENST00000569003 562 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 TVP23CP2-201ENST00000571473 623 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC027455.1-201ENST00000574104 594 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AL031320.1-201ENST00000604177 357 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AL136370.1-201ENST00000608166 691 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX3Q99909 AL121890.3-201ENST00000618494 516 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC087385.3-201ENST00000620477 187 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AP003476.1-201ENST00000623984 516 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 AC073342.3-201ENST00000624211 193 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 FAM157B-203ENST00000639350 358 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 LINC01808-202ENST00000641680 1116 ntBASIC4.01□□□□□ -1.77
SSX3Q99909 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX3Q99909 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX3Q99909 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX3Q99909 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX3Q99909 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SSX3Q99909 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 NSRP1P1-201ENST00000444067 1693 ntBASIC4□□□□□ -1.77
SSX3Q99909 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 AL031985.3-201ENST00000565390 2449 ntBASIC4□□□□□ -1.77
SSX3Q99909 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 AP001486.2-201ENST00000561652 5113 ntBASIC4□□□□□ -1.77
SSX3Q99909 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4□□□□□ -1.77
SSX3Q99909 RNU6-356P-201ENST00000384140 107 ntBASIC4□□□□□ -1.77
SSX3Q99909 RNU6-932P-201ENST00000391108 106 ntBASIC4□□□□□ -1.77
SSX3Q99909 AL024507.1-201ENST00000412741 274 ntBASIC4□□□□□ -1.77
SSX3Q99909 PDSS1P1-201ENST00000422953 1114 ntBASIC4□□□□□ -1.77
SSX3Q99909 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4□□□□□ -1.77
SSX3Q99909 CKS1BP6-201ENST00000424932 240 ntBASIC4□□□□□ -1.77
SSX3Q99909 AL360081.1-201ENST00000428299 555 ntBASIC4□□□□□ -1.77
SSX3Q99909 PSMA2P3-201ENST00000429685 675 ntBASIC4□□□□□ -1.77
SSX3Q99909 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4□□□□□ -1.77
SSX3Q99909 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4□□□□□ -1.77
SSX3Q99909 AC008072.1-201ENST00000434254 824 ntBASIC4□□□□□ -1.77
SSX3Q99909 RPL7P11-201ENST00000437586 658 ntBASIC4□□□□□ -1.77
SSX3Q99909 RPS29P9-201ENST00000440360 171 ntBASIC4□□□□□ -1.77
SSX3Q99909 RPS26P30-201ENST00000443431 335 ntBASIC4□□□□□ -1.77
SSX3Q99909 OR52J1P-201ENST00000450596 932 ntBASIC4□□□□□ -1.77
SSX3Q99909 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4□□□□□ -1.77
SSX3Q99909 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms