Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 RNU6-225P-201ENST00000384613 103 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AL022722.2-201ENST00000402519 180 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 RAC1P3-201ENST00000416129 580 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC006011.1-201ENST00000442758 349 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 FCF1P7-201ENST00000451185 558 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 RPS7P7-201ENST00000463499 571 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 MTCO3P42-201ENST00000509488 518 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 MTCO3P39-201ENST00000514812 518 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC009303.3-201ENST00000591103 736 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC010200.2-201ENST00000605098 235 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AL591034.3-201ENST00000605511 685 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 HMGB1P50-201ENST00000605814 607 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC090506.2-201ENST00000624521 419 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC093311.1-201ENST00000506586 2021 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AL133412.1-201ENST00000380194 2992 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 AC134882.1-201ENST00000603738 1676 ntBASIC4.15□□□□□ -1.75
C9orf72Q96LT7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf72Q96LT7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 SNORD35B-201ENST00000363660 87 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 RNU1-89P-201ENST00000384592 164 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 SNORA57.1-201ENST00000391227 145 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC240504.1-201ENST00000395709 845 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AL450992.3-201ENST00000413192 568 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 RPL17P36-201ENST00000420302 549 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 RPS6P12-201ENST00000432491 726 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 BTF3P10-201ENST00000433415 495 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AL392003.1-201ENST00000434394 243 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 YWHAQP9-201ENST00000445891 512 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 DEFB109D-201ENST00000529497 240 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC107016.1-201ENST00000550463 337 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AL049874.4-201ENST00000557593 255 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AL161729.3-201ENST00000603533 673 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 AP003392.5-201ENST00000607857 415 ntBASIC4.14□□□□□ -1.75
C9orf72Q96LT7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
C9orf72Q96LT7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AL592437.2-201ENST00000421655 2434 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RNA5SP322-201ENST00000363617 119 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RPS27AP11-201ENST00000402798 447 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RNA5SP317-201ENST00000410176 116 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RN7SKP222-201ENST00000410651 315 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RNA5SP311-201ENST00000411290 116 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 COX6CP15-201ENST00000426313 211 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AL358472.1-201ENST00000431295 329 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC096638.2-201ENST00000434965 711 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 MTCYBP29-201ENST00000436327 1006 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 AC092013.1-201ENST00000438795 332 ntBASIC4.13□□□□□ -1.75
C9orf72Q96LT7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
C9orf72Q96LT7 RPS27AP13-201ENST00000498403 237 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms