Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC015689.2-201ENST00000528172 1738 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC105749.1-201ENST00000631338 2008 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 SNORD16-201ENST00000362803 99 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 MIR143-201ENST00000385300 106 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RN7SKP286-201ENST00000410894 299 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RNU6-1068P-201ENST00000410958 103 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 HMGB3P31-201ENST00000413333 595 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 SNRPFP1-201ENST00000414761 252 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 NDUFB4P5-201ENST00000415445 361 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 MRPL50P2-201ENST00000416821 482 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 OR5W1P-201ENST00000423705 938 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 HIGD1AP16-201ENST00000450986 258 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RPSAP39-201ENST00000467439 883 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RPS3AP50-201ENST00000487064 803 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 MTND6P8-201ENST00000503471 522 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 ATP5LP3-201ENST00000514223 304 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RNU4-49P-201ENST00000516080 140 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RNU6-964P-201ENST00000516524 69 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 SNORA31.13-201ENST00000516624 135 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RNU6-835P-201ENST00000516974 104 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC112191.2-201ENST00000522428 333 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 CYP2C61P-201ENST00000604072 290 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AL352984.2-201ENST00000611153 546 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AP005431.1-201ENST00000618479 319 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC010624.4-201ENST00000597606 1351 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RBPJP7-201ENST00000442803 1447 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 RBPJP5-201ENST00000449433 1447 ntBASIC7.27□□□□□ -1.25
TRIM47Q96LD4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 Y_RNA.158-201ENST00000363651 101 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 Y_RNA.381-201ENST00000365666 102 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 MIR937-201ENST00000401271 86 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AL121977.1-201ENST00000401636 979 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AL391361.1-201ENST00000405580 489 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 HMGB1P11-201ENST00000413899 637 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 RPL6P29-201ENST00000414863 865 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 DSTNP5-201ENST00000427921 523 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 RPL37P21-201ENST00000435890 276 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AL049734.2-201ENST00000441066 616 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AP000281.1-201ENST00000444036 316 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 FAM103A2P-201ENST00000444122 354 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC132479.1-201ENST00000449160 144 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 MGAT2P1-201ENST00000449718 797 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 APOOP2-201ENST00000461561 539 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC083798.1-201ENST00000472671 131 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 HMGN2P25-201ENST00000486956 268 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC022206.1-201ENST00000495947 347 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 RNU6-1143P-201ENST00000516125 104 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC009902.1-201ENST00000519351 183 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC079600.1-201ENST00000550326 297 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC053481.3-201ENST00000577881 843 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 KPNA2P3-201ENST00000584190 848 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC005332.4-201ENST00000592752 579 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC125494.2-201ENST00000602431 657 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AP001823.1-201ENST00000604056 1003 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC021646.1-201ENST00000605469 484 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 MRPL57P1-201ENST00000621486 265 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 MIR6730-201ENST00000622213 67 ntBASIC7.26□□□□□ -1.25
TRIM47Q96LD4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TRIM47Q96LD4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms