Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.3□□□□□ -1.56
USP47Q96K76 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.3□□□□□ -1.56
USP47Q96K76 RNU7-157P-201ENST00000459600 66 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 AC006499.5-201ENST00000505037 514 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 GOLGA5P1-201ENST00000507317 980 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
USP47Q96K76 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.3□□□□□ -1.56
USP47Q96K76 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.3□□□□□ -1.56
USP47Q96K76 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.3□□□□□ -1.56
USP47Q96K76 AL354760.1-201ENST00000608357 643 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 AC096577.2-201ENST00000611455 153 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.3□□□□□ -1.56
USP47Q96K76 AC074276.2-201ENST00000619891 348 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.3□□□□□ -1.56
USP47Q96K76 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP47Q96K76 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.3□□□□□ -1.56
USP47Q96K76 AC027290.2-201ENST00000623210 18662 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 AC012078.1-201ENST00000405035 1646 ntBASIC5.3□□□□□ -1.56
USP47Q96K76 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.3□□□□□ -1.56
USP47Q96K76 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP47Q96K76 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.29□□□□□ -1.56
USP47Q96K76 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP47Q96K76 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP47Q96K76 RPL7P60-201ENST00000397636 735 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 HLFP1-201ENST00000402375 499 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.29□□□□□ -1.56
USP47Q96K76 TRBV12-2-201ENST00000489763 344 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 RNA5SP164-201ENST00000516533 110 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.29□□□□□ -1.56
USP47Q96K76 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.29□□□□□ -1.56
USP47Q96K76 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.29□□□□□ -1.56
USP47Q96K76 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.29□□□□□ -1.56
USP47Q96K76 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
USP47Q96K76 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.29□□□□□ -1.56
USP47Q96K76 DPRXP4-201ENST00000578053 568 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 MIR5187-201ENST00000583479 76 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC244505.7-201ENST00000599675 272 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AL049634.3-201ENST00000604968 457 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.29□□□□□ -1.56
USP47Q96K76 AL357559.1-201ENST00000622228 274 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
USP47Q96K76 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.29□□□□□ -1.56
USP47Q96K76 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP47Q96K76 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP47Q96K76 AC018555.1-201ENST00000567548 1980 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 SNORA5A-201ENST00000384111 134 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
USP47Q96K76 AC010740.1-201ENST00000417035 684 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC068533.1-201ENST00000418542 415 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 MTND2P15-201ENST00000418575 892 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC114814.2-201ENST00000419195 485 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 KRR1P1-201ENST00000419430 803 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC092447.2-201ENST00000435487 669 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.29□□□□□ -1.56
USP47Q96K76 AL451050.1-201ENST00000450126 415 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC069499.1-201ENST00000489433 509 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 UBE2CP3-201ENST00000502715 450 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.29□□□□□ -1.56
USP47Q96K76 SNORA74D-201ENST00000516404 141 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 SCARNA13-201ENST00000516672 275 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.29□□□□□ -1.56
USP47Q96K76 OR7E13P-201ENST00000526052 910 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AP000889.1-201ENST00000530968 660 ntBASIC5.29□□□□□ -1.56
USP47Q96K76 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.29□□□□□ -1.56
USP47Q96K76 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.29□□□□□ -1.56
USP47Q96K76 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP47Q96K76 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
USP47Q96K76 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP47Q96K76 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
USP47Q96K76 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP47Q96K76 KPNA2P2-201ENST00000419546 1489 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 MTCO1P46-201ENST00000451639 1491 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 LINC02471-203ENST00000641941 4752 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 LINC01355-201ENST00000566551 5444 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
USP47Q96K76 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP47Q96K76 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP47Q96K76 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
USP47Q96K76 OR5AW1P-201ENST00000426334 1006 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.28□□□□□ -1.56
USP47Q96K76 SETD6P1-201ENST00000444575 317 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 AC108941.1-201ENST00000502853 530 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
USP47Q96K76 AC138409.2-202ENST00000507274 458 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 RNU1-95P-201ENST00000516357 160 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 RNU1-128P-201ENST00000516704 160 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.28□□□□□ -1.56
USP47Q96K76 OR1AB1P-201ENST00000585564 761 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.28□□□□□ -1.56
USP47Q96K76 AL034408.1-202ENST00000636088 415 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 OR5AC4P-202ENST00000642086 985 ntBASIC5.28□□□□□ -1.56
USP47Q96K76 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.28□□□□□ -1.56
USP47Q96K76 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USP47Q96K76 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.27□□□□□ -1.57
USP47Q96K76 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP47Q96K76 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.27□□□□□ -1.57
USP47Q96K76 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP47Q96K76 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.27□□□□□ -1.57
USP47Q96K76 MIR491-201ENST00000384877 84 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms