Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MIR16-1-201ENST00000385271 89 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AL357515.1-201ENST00000402967 542 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC073136.2-201ENST00000417282 849 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 GTF2IP23-201ENST00000423746 351 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC073069.1-201ENST00000428657 441 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC104978.1-201ENST00000449387 391 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC234781.3-201ENST00000452540 973 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 ART2BP-201ENST00000453501 499 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 APOOP2-201ENST00000461561 539 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 RPS3AP22-201ENST00000488297 769 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC105313.1-201ENST00000509121 353 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC093755.1-201ENST00000512950 1023 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 NDUFB4P12-201ENST00000513465 390 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 PDCL2P2-201ENST00000533651 189 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 DPRXP5-201ENST00000604662 539 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AL021707.7-201ENST00000607991 416 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC018926.3-201ENST00000618841 406 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC022509.4-201ENST00000621404 572 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC026422.1-201ENST00000623961 452 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 CR392039.4-201ENST00000624968 501 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AF001550.2-201ENST00000636643 217 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC114546.3-201ENST00000623582 1734 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 AC008758.3-201ENST00000507003 1829 ntBASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.5□□□□□ -1.53
CDK5RAP3Q96JB5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 DDX18P5-201ENST00000534547 1306 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC015813.6-201ENST00000624409 5808 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 OR5H2-201ENST00000355273 945 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 GSTA8P-201ENST00000404253 637 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 CHEK2P3-201ENST00000416118 248 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 RPL7P4-203ENST00000430239 730 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 SLC25A18P1-201ENST00000449385 454 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 MTND6P6-201ENST00000478031 263 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC104971.1-201ENST00000495117 578 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 RN7SL808P-201ENST00000496066 299 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 DYNLL1P6-201ENST00000503440 264 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 MRPS33P2-201ENST00000507850 322 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 ENPP7P9-201ENST00000514456 627 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 RN7SKP283-201ENST00000517197 270 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 COX6B1P6-201ENST00000522347 255 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AP003461.1-201ENST00000528866 78 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 OR4C2P-201ENST00000530855 1064 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC011487.3-201ENST00000593607 453 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 NTAN1P1-201ENST00000603150 646 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC080013.3-201ENST00000606839 578 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AL445222.1-201ENST00000607259 628 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AP001521.2-201ENST00000608772 546 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC131238.1-201ENST00000617135 328 ntBASIC5.49□□□□□ -1.53
CDK5RAP3Q96JB5 AC015914.2-201ENST00000618167 288 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms