Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 AC110743.1-201ENST00000584870 478 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 MTCO2P22-201ENST00000603246 681 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 AC025946.2-201ENST00000603398 234 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 OR6R2P-201ENST00000609216 300 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 RMST_9.1-201ENST00000619945 193 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 MARK2P15-201ENST00000432204 2186 ntBASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
ECHDC3Q96DC8 AL592437.2-201ENST00000421655 2434 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 RNA5SP479-201ENST00000364858 117 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 HMGB3P19-201ENST00000403971 560 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 RN7SKP222-201ENST00000410651 315 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 RN7SKP263-201ENST00000411194 309 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 OR5BE1P-201ENST00000425977 939 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 BUD31P2-201ENST00000449374 300 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 RPL23AP2-201ENST00000471227 466 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC010627.1-201ENST00000503819 1294 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC108043.1-201ENST00000512696 574 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC135001.1-201ENST00000544546 283 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC022968.1-201ENST00000567372 442 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC004825.2-201ENST00000616634 455 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 AC009318.3-201ENST00000616916 503 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 OR5BE1P-202ENST00000641168 1176 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 PNPT1P2-201ENST00000456768 2050 ntBASIC4.06□□□□□ -1.76
ECHDC3Q96DC8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 SNORD35B-201ENST00000363660 87 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 RNA5SP283-201ENST00000365604 119 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AL356967.1-201ENST00000406305 431 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AL162151.2-201ENST00000448875 158 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 RPS11P1-201ENST00000451072 473 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 FABP3P2-201ENST00000453169 399 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 ATG10-AS1-201ENST00000504846 648 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC034244.2-201ENST00000514668 858 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 MIR4716-201ENST00000579628 84 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC104662.1-201ENST00000604448 511 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC005021.1-201ENST00000608730 355 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 IQCB2P-201ENST00000401788 1633 ntBASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ECHDC3Q96DC8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ECHDC3Q96DC8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms