Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS3Q969F9 AC092647.3-201ENST00000443044 633 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 OR7E125P-201ENST00000443450 846 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AL137845.2-201ENST00000444292 988 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AC012512.1-201ENST00000446594 718 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AC000111.2-201ENST00000448200 210 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AL133217.1-201ENST00000450980 425 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS3Q969F9 RPSAP50-201ENST00000481955 852 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 BET1P1-201ENST00000482276 359 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AC093270.2-201ENST00000486157 792 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS3Q969F9 RNU6-1129P-201ENST00000515964 104 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 Y_RNA.688-201ENST00000516565 95 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 RPL23AP53-201ENST00000521854 457 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.47□□□□□ -1.53
HPS3Q969F9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.47□□□□□ -1.53
HPS3Q969F9 LSM3P2-201ENST00000551246 273 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS3Q969F9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.47□□□□□ -1.53
HPS3Q969F9 AC002400.1-201ENST00000569310 726 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.47□□□□□ -1.53
HPS3Q969F9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.47□□□□□ -1.53
HPS3Q969F9 AL158042.1-201ENST00000605338 460 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AC018638.7-201ENST00000605836 1114 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 AL450489.1-201ENST00000612071 468 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 OR8B1P-202ENST00000641132 1178 ntBASIC5.47□□□□□ -1.53
HPS3Q969F9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.47□□□□□ -1.53
HPS3Q969F9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HPS3Q969F9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
HPS3Q969F9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 OR5H2-201ENST00000355273 945 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HPS3Q969F9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HPS3Q969F9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 TBCAP2-201ENST00000416175 326 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC009302.1-201ENST00000417147 390 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC093162.1-201ENST00000419682 124 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AL365396.1-201ENST00000430854 671 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 PSMD10P3-201ENST00000437000 448 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 GAPDHP36-201ENST00000480688 918 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC073073.1-201ENST00000493920 463 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 RNU6-1225P-201ENST00000516336 65 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AF279873.1-201ENST00000523393 313 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AL132657.2-201ENST00000564417 358 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.46□□□□□ -1.54
HPS3Q969F9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.46□□□□□ -1.54
HPS3Q969F9 VN1R82P-201ENST00000601481 356 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC010200.2-201ENST00000605098 235 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AL049794.2-201ENST00000616301 365 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AC068620.4-201ENST00000636730 1182 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.46□□□□□ -1.54
HPS3Q969F9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 AP000776.1-201ENST00000530032 1663 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AL672167.1-205ENST00000641112 3080 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 AL118496.1-201ENST00000440201 1812 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.46□□□□□ -1.54
HPS3Q969F9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HPS3Q969F9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HPS3Q969F9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AC009229.4-201ENST00000623854 1947 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AL022393.1-201ENST00000625142 1677 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HPS3Q969F9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HPS3Q969F9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HPS3Q969F9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.45□□□□□ -1.54
HPS3Q969F9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HPS3Q969F9 NCSTNP1-201ENST00000406229 144 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AL133264.1-201ENST00000407157 562 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 RNA5SP80-201ENST00000410475 111 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 RPL7P44-201ENST00000424827 742 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.45□□□□□ -1.54
HPS3Q969F9 TXNL1P1-201ENST00000429528 554 ntBASIC5.45□□□□□ -1.54
HPS3Q969F9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.45□□□□□ -1.54
HPS3Q969F9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms