Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 OR11H4-201ENST00000315409 1082 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 RN7SKP44-201ENST00000363602 316 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 SNORA56-201ENST00000383966 129 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 SNORA11B-201ENST00000408175 129 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AMD1P2-201ENST00000412936 992 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL807761.1-201ENST00000417622 171 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 MTCYBP7-201ENST00000419540 1134 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 RPL23AP38-201ENST00000423801 469 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 YY1P1-201ENST00000427625 668 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 IFNNP1-201ENST00000429219 553 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL500522.2-201ENST00000448562 343 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC105137.1-201ENST00000484355 562 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC106872.2-201ENST00000494303 480 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 HAUS1P1-201ENST00000505275 832 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 RFPL1S-203ENST00000539579 330 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC068714.1-201ENST00000559623 800 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC022968.1-201ENST00000567372 442 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC015911.5-201ENST00000587076 451 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 EIF1P6-201ENST00000600054 334 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 OR6R2P-201ENST00000609216 300 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AL645927.2-201ENST00000618350 349 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 MIR8059-201ENST00000620427 81 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC110792.3-201ENST00000595906 1614 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 PHKBP1-201ENST00000450951 1951 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 CCT8P1-201ENST00000413611 1657 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 LARP1BP1-201ENST00000506036 1359 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 AC005261.4-201ENST00000600047 1385 ntBASIC3.36□□□□□ -1.87
RTN4IP1Q8WWV3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 LINC00561-201ENST00000565815 2738 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 MIR421-201ENST00000365696 85 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 HMGN2P8-201ENST00000391458 268 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 OR6C69P-201ENST00000394268 893 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AL590806.1-201ENST00000415818 853 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 FAR2P4-202ENST00000425399 584 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AL157884.3-201ENST00000448273 1184 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 MORF4L1P4-201ENST00000450245 976 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC010307.1-201ENST00000467206 836 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 STRADBP1-201ENST00000478954 1281 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 METTL15P1-201ENST00000481421 1045 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC093824.1-201ENST00000508796 343 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 RNU6-347P-201ENST00000516658 105 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 MTND1P6-201ENST00000523621 946 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC067805.1-201ENST00000559344 470 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC141257.3-201ENST00000572906 215 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 MIR3138-201ENST00000585238 82 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC245128.3-201ENST00000594721 748 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 HMGB1P51-201ENST00000605166 638 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 ARF4P1-201ENST00000605447 541 ntBASIC3.35□□□□□ -1.87
RTN4IP1Q8WWV3 AC007620.3-201ENST00000608131 497 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms