Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM3Q8TF72 RNU2-65P-201ENST00000410162 185 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC092647.1-201ENST00000420654 287 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 OR4F13P-201ENST00000428478 931 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 VN1R25P-201ENST00000443385 738 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 VN1R40P-201ENST00000455196 941 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 GMPSP1-201ENST00000514075 579 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 DYNLL1P4-201ENST00000549314 266 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 GTF2IP8-201ENST00000560687 584 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AC009237.17-201ENST00000618111 748 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 AF001550.2-201ENST00000636643 217 ntBASIC3.96□□□□□ -1.77
SHROOM3Q8TF72 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 RPL21P17-201ENST00000397467 475 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AL122016.1-201ENST00000403365 367 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AL391219.1-201ENST00000422570 483 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AC087369.1-201ENST00000520775 996 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 MTND1P6-201ENST00000523621 946 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AC116312.1-201ENST00000606841 314 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 AL354798.1-201ENST00000622505 329 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 BDP1P-201ENST00000582658 1990 ntBASIC3.96□□□□□ -1.78
SHROOM3Q8TF72 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 MIR448-201ENST00000362131 111 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 RPL5P32-201ENST00000454085 879 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 PLGLA-201ENST00000465668 449 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 ACTR3P3-201ENST00000480448 893 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AL139099.1-201ENST00000497398 403 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 MIR5195-201ENST00000583555 115 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AL592436.1-201ENST00000605135 558 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AC018690.1-201ENST00000608144 626 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 SCN1A-220ENST00000641603 12506 ntBASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SHROOM3Q8TF72 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 OR52E6-202ENST00000379946 954 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 U8.11-201ENST00000384699 133 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 U8.12-201ENST00000384701 133 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 PPIAP3-201ENST00000450588 505 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 U8.18-201ENST00000459285 133 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 AC092691.2-201ENST00000461787 803 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 RPS20P21-201ENST00000466859 343 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 NDUFA5P2-201ENST00000519723 344 ntBASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM3Q8TF72 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms