Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AP001086.1-201ENST00000494882 321 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC025674.1-201ENST00000507074 324 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC008802.1-201ENST00000519121 791 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC092851.1-201ENST00000535964 478 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 FAM60CP-201ENST00000591086 664 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL161729.3-201ENST00000603533 673 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC138649.5-201ENST00000637456 137 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC097504.1-201ENST00000515103 2415 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 SNORD6-201ENST00000365444 73 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 ZNF603P-201ENST00000405613 487 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 RNA5SP498-201ENST00000411342 120 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 ELOCP19-201ENST00000411919 318 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AMD1P2-201ENST00000412936 992 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 FAR2P2-201ENST00000413041 594 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 FAR2P4-202ENST00000425399 584 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 MTCO1P54-201ENST00000430139 712 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 TPTE2P3-201ENST00000441562 1189 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 RPL36AP13-201ENST00000457490 317 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC011276.1-201ENST00000469688 323 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC041039.1-201ENST00000485656 536 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC007686.1-201ENST00000488511 463 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 RNU7-143P-201ENST00000516781 65 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC107016.1-201ENST00000550463 337 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 MIR6820-201ENST00000611508 62 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 RN7SL722P-201ENST00000617780 284 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 RN7SL565P-201ENST00000618246 284 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AL359715.5-201ENST00000623431 443 ntBASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLHC1Q8NHS4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 ERCC6-202ENST00000374127 1782 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC116667.1-201ENST00000604855 2072 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC083899.2-201ENST00000423285 1376 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AL161909.1-201ENST00000397390 712 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 RN7SKP182-201ENST00000410772 298 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 MTND4P11-201ENST00000417020 1058 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 COX6B1P7-201ENST00000430845 235 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 AL162151.2-201ENST00000448875 158 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 CEACAMP4-201ENST00000457676 421 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 RN7SL459P-201ENST00000481078 302 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 RPL31P61-201ENST00000496160 376 ntBASIC3.91□□□□□ -1.78
CLHC1Q8NHS4 CDH12P2-201ENST00000504393 298 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms