Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 DHX40P1-201ENST00000588725 1412 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 OR4A15-201ENST00000314706 1035 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RNU6-251P-201ENST00000363235 104 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP189-201ENST00000364920 115 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 SNORA66-201ENST00000384792 133 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP372-201ENST00000390836 115 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MTCO1P56-201ENST00000401674 224 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AL121972.1-201ENST00000402023 252 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RN7SKP126-201ENST00000411143 300 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RGS17P1-201ENST00000423358 553 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC011242.1-201ENST00000433596 1158 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ELOCP18-201ENST00000434209 337 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 Z80107.2-201ENST00000445127 392 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC104306.1-201ENST00000449702 371 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 NDUFA5P7-201ENST00000452914 242 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MTCO3P2-201ENST00000457365 171 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RN7SL222P-201ENST00000476452 299 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RN7SL97P-201ENST00000486780 299 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RN7SL547P-201ENST00000490793 290 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 DEFB109F-201ENST00000491870 277 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RPS6P4-201ENST00000494693 758 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC010350.1-201ENST00000504908 231 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC005798.1-201ENST00000513715 387 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MTCO1P30-201ENST00000515244 580 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RN7SKP116-201ENST00000516902 319 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 IGLVIV-53-201ENST00000520107 367 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ZNF705CP-201ENST00000530515 889 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AP003385.6-201ENST00000531603 374 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC087897.1-201ENST00000550134 156 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 MTCYBP27-201ENST00000555160 670 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC090330.1-201ENST00000588646 764 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC113368.1-201ENST00000603736 382 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 HSPE1P14-201ENST00000605812 302 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC018754.1-201ENST00000607486 925 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AP005137.2-201ENST00000609238 400 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC078899.5-201ENST00000612475 178 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RNA5SP440-201ENST00000612665 119 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC244100.4-201ENST00000617747 388 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC127024.6-201ENST00000621598 424 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC099494.2-201ENST00000623371 978 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 AC087821.2-201ENST00000637086 450 ntBASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01561Q8N1V8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 AL157700.1-201ENST00000561973 1432 ntBASIC3.29□□□□□ -1.88
LINC01561Q8N1V8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms