Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL049829.1-201ENST00000465411 156 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RPL7P19-201ENST00000469948 618 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 VWA8P1-201ENST00000510889 176 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 NPM1P6-201ENST00000521088 871 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 MTND1P36-201ENST00000522384 936 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC022655.2-201ENST00000577280 318 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC096553.1-201ENST00000605169 829 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC092574.1-201ENST00000609771 420 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC026368.1-201ENST00000614934 690 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 RMST_9.1-201ENST00000619945 193 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AC097460.3-201ENST00000623099 442 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 AL356121.2-201ENST00000624715 780 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 LINC01355-201ENST00000566551 5444 ntBASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
C9orf40Q8IXQ3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 RNU6-792P-201ENST00000363490 107 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 RN7SKP33-201ENST00000410942 340 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL035458.1-201ENST00000433096 585 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC078857.1-201ENST00000469870 667 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 SNORA31.13-201ENST00000516624 135 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 CIR1P1-201ENST00000524055 1133 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC084759.1-201ENST00000561168 290 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL109741.3-201ENST00000561748 592 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 MIR548Y-201ENST00000582739 110 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC005776.1-201ENST00000603164 290 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC008638.3-201ENST00000603341 463 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC084824.5-201ENST00000612009 413 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AP001005.3-201ENST00000622049 129 ntBASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.87□□□□□ -1.79
C9orf40Q8IXQ3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP513-201ENST00000364648 118 ntBASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 RPS26P8-201ENST00000393490 348 ntBASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 AC004552.1-201ENST00000419089 348 ntBASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 AC048351.1-201ENST00000420064 602 ntBASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 FO393419.3-201ENST00000428741 282 ntBASIC3.86□□□□□ -1.79
C9orf40Q8IXQ3 MTCO3P21-201ENST00000430791 643 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms