Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC097463.1-201ENST00000447288 481 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RPL23AP64-201ENST00000469465 435 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC013356.1-201ENST00000489027 564 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 LSM3P4-201ENST00000502948 309 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RPL39P5-202ENST00000512505 151 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 RNA5SP216-201ENST00000516111 123 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.665-201ENST00000516177 98 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 IGKV3D-25-201ENST00000519599 235 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 TRIM77BP-201ENST00000524985 1119 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 CYCSP2-201ENST00000558168 301 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 MRPS21P8-201ENST00000569196 235 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AF038458.1-201ENST00000588406 262 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC133104.2-201ENST00000615272 193 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AP004607.9-201ENST00000618202 316 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AP001264.1-201ENST00000620602 703 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AL731566.1-201ENST00000620490 1937 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 MAPK10-383ENST00000642032 3390 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 ZNF812P-201ENST00000457674 1694 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 AC104162.1-201ENST00000430831 2382 ntBASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS3Q8IXF0 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC011978.2-201ENST00000569835 2054 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.100-201ENST00000363141 102 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RNU1-24P-201ENST00000364285 165 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.255-201ENST00000364581 97 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.461-201ENST00000384263 103 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RN7SKP158-201ENST00000410453 326 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RNU4-6P-201ENST00000410804 122 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 TMBIM7P-201ENST00000418074 855 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RBMY2QP-201ENST00000429799 1147 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 HMGB3P11-201ENST00000440127 604 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AL161722.1-201ENST00000446972 1032 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 GSTA11P-201ENST00000452866 669 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RPL18AP17-201ENST00000455326 198 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RPL7P5-201ENST00000471472 736 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC016687.1-201ENST00000482574 353 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC091965.3-201ENST00000506236 208 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 SLC25A15P5-201ENST00000508033 253 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 TMEM248P1-201ENST00000510579 951 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RNU6-1023P-201ENST00000516137 106 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 SNORA81.3-201ENST00000517283 198 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC083923.1-201ENST00000523708 376 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AP005435.4-201ENST00000529514 284 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AL121579.2-201ENST00000555466 590 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 TPRX1P1-201ENST00000557620 319 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AP001180.3-201ENST00000582221 145 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 MIR3942-201ENST00000585264 109 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC008507.3-201ENST00000585753 472 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC092266.1-201ENST00000610958 165 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC015922.4-201ENST00000612568 690 ntBASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS3Q8IXF0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms