Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RHEBP2-201ENST00000450289 600 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC239809.1-201ENST00000450470 217 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 EIF4A1P11-201ENST00000451239 222 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC069528.1-202ENST00000482888 637 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC093752.1-206ENST00000511823 336 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 snoZ278.1-201ENST00000517059 112 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 OR10V3P-201ENST00000525712 725 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AL442163.2-201ENST00000553912 710 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 DPRXP4-201ENST00000578053 568 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC011477.5-201ENST00000586571 259 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 MIR92B-201ENST00000607575 96 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AL157392.4-201ENST00000609756 345 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC123768.4-201ENST00000616244 701 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 ZYXP1-201ENST00000617638 118 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AP005019.3-201ENST00000620418 560 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AP001002.2-201ENST00000625137 386 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AC025031.4-201ENST00000621248 3271 ntBASIC5.13□□□□□ -1.59
HERC6Q8IVU3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HERC6Q8IVU3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC017079.1-201ENST00000333650 415 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 MTCO1P56-201ENST00000401674 224 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 U3.32-201ENST00000408116 212 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 RN7SKP97-201ENST00000410966 333 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 RNU2-6P-201ENST00000411404 190 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC104333.2-201ENST00000422630 192 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 BMS1P19-201ENST00000433925 393 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 USP9YP24-201ENST00000434374 697 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 Z80107.1-201ENST00000436830 412 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 USP9YP17-201ENST00000444617 696 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 HMGB3P6-201ENST00000444896 598 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 CYCSP24-201ENST00000445119 316 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AL359073.1-201ENST00000448036 403 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 RN7SL303P-201ENST00000469773 251 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 MTND4LP2-201ENST00000502312 285 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 MTND2P32-201ENST00000521584 1038 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 DEFB130C-202ENST00000530001 230 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 BPTFP1-201ENST00000579209 492 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 SNORA74C-1-201ENST00000580726 201 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AL133338.2-201ENST00000604292 736 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 ARF4P1-201ENST00000605447 541 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC024060.1-201ENST00000607052 494 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC012409.3-201ENST00000611343 981 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AL133243.1-201ENST00000614487 366 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC114781.5-201ENST00000615297 108 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 OR1S1-201ENST00000624470 978 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC008785.1-201ENST00000624475 456 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 AL034370.1-201ENST00000397254 1590 ntBASIC5.12□□□□□ -1.59
HERC6Q8IVU3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.12□□□□□ -1.59
HERC6Q8IVU3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 ZNF137P-201ENST00000456718 1920 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AP001642.1-201ENST00000624727 2117 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 AL512646.1-201ENST00000269395 1077 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 SNORA71.2-201ENST00000364941 134 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HERC6Q8IVU3 MTCO2P31-201ENST00000402702 684 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.11□□□□□ -1.59
HERC6Q8IVU3 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms