Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 USP9YP5-201ENST00000511770 630 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC007599.1-201ENST00000568688 1174 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC012417.1-201ENST00000582307 1039 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC123786.2-201ENST00000603459 275 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC005191.1-201ENST00000603950 358 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 ELOCP34-201ENST00000604436 327 ntBASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC50Q8IVM0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RNU1-132P-201ENST00000364300 164 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RNU6-31P-201ENST00000384388 108 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RNU4-25P-201ENST00000410569 230 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 BTF3P9-201ENST00000418784 283 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC009480.2-201ENST00000422916 432 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RWDD4P2-201ENST00000426392 563 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 IFNNP1-201ENST00000429219 553 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 COX6B1P7-201ENST00000430845 235 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC087650.1-201ENST00000431445 468 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC011742.1-201ENST00000431448 434 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 MRPS33P4-201ENST00000434892 317 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC006011.1-201ENST00000442758 349 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RN7SL93P-201ENST00000463035 293 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC010307.1-201ENST00000467206 836 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC011276.1-201ENST00000469688 323 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 METTL15P1-201ENST00000481421 1045 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RWDD4P1-201ENST00000488019 565 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 NPM1P47-201ENST00000560843 856 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 MTATP6P25-201ENST00000574491 261 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC007448.1-201ENST00000582714 234 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC010200.2-201ENST00000605098 235 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AL391834.1-201ENST00000609609 560 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC073342.3-201ENST00000624211 193 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 AC116667.1-201ENST00000604855 2072 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 Z73965.1-201ENST00000623412 2297 ntBASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC50Q8IVM0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.73
CCDC50Q8IVM0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC114546.3-201ENST00000623582 1734 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC083799.1-201ENST00000366451 910 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 ELOCP19-201ENST00000411919 318 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC048351.1-201ENST00000420064 602 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 MTCO1P57-201ENST00000432182 261 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 ACTR3P2-201ENST00000439585 1257 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 RSL24D1P2-201ENST00000445584 366 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC009963.2-201ENST00000453431 138 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AL354710.1-201ENST00000453641 246 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 MTCO3P20-201ENST00000454926 688 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC068305.1-201ENST00000497406 726 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 HAUS1P1-201ENST00000505275 832 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC020593.1-201ENST00000507399 299 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 KRT19P6-201ENST00000510983 209 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC068714.1-201ENST00000559623 800 ntBASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC50Q8IVM0 AC068790.4-201ENST00000602474 263 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms