Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC005261.2-201ENST00000593427 4258 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 MAPK10-303ENST00000641324 3959 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 RPL7P60-201ENST00000397636 735 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 LARP7P3-201ENST00000579888 337 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC104662.1-201ENST00000604448 511 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 AC019278.1-201ENST00000623516 479 ntBASIC3.67□□□□□ -1.82
RIF1Q5UIP0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RIF1Q5UIP0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC100778.3-201ENST00000580060 1750 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 SNORA48.8-201ENST00000391324 134 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AL034403.1-201ENST00000399414 885 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 HIGD1AP4-201ENST00000430194 280 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 HMGB1P37-201ENST00000439613 609 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AP001992.1-205ENST00000462248 379 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 RPL23AP87-202ENST00000573039 466 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 COX6CP4-201ENST00000605798 228 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC093732.2-201ENST00000607950 274 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC090337.1-201ENST00000579651 2074 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 MIR921-201ENST00000401133 56 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 RNU7-143P-201ENST00000516781 65 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 EIF5A2P1-201ENST00000564027 460 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC079684.1-201ENST00000621405 437 ntBASIC3.66□□□□□ -1.82
RIF1Q5UIP0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.66□□□□□ -1.82
RIF1Q5UIP0 AC093297.3-201ENST00000607056 2517 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 UBTFL3-201ENST00000418934 1024 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 AC009506.2-201ENST00000420635 840 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 AC006511.1-201ENST00000470614 315 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 UBTFL6-201ENST00000477929 1024 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 VN1R104P-201ENST00000505115 1009 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 CYCSP28-201ENST00000534284 321 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 AC103881.1-201ENST00000603476 538 ntBASIC3.65□□□□□ -1.82
RIF1Q5UIP0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RIF1Q5UIP0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.65□□□□□ -1.83
RIF1Q5UIP0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 RN7SKP222-201ENST00000410651 315 ntBASIC3.65□□□□□ -1.83
RIF1Q5UIP0 BX842559.1-201ENST00000419615 532 ntBASIC3.65□□□□□ -1.83
RIF1Q5UIP0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 HSPE1P27-201ENST00000430808 296 ntBASIC3.65□□□□□ -1.83
RIF1Q5UIP0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 AC006517.1-201ENST00000480485 328 ntBASIC3.65□□□□□ -1.83
RIF1Q5UIP0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RIF1Q5UIP0 AC007159.1-201ENST00000566529 4706 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 MIR422A-201ENST00000362286 90 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 SNORA5B-201ENST00000363786 132 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.64□□□□□ -1.83
RIF1Q5UIP0 snoU109.6-201ENST00000516831 118 ntBASIC3.64□□□□□ -1.83
RIF1Q5UIP0 AC113192.3-201ENST00000529152 742 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms