Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL355816.1-201ENST00000607951 118 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC009237.17-201ENST00000618111 748 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 MIR6853-201ENST00000619642 74 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AL359757.1-201ENST00000623176 255 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC091953.3-201ENST00000623220 236 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC068787.1-201ENST00000623908 691 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.89□□□□□ -1.63
HDAC4P56524 OR2L1P-202ENST00000641567 1023 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AC139713.2-210ENST00000641741 992 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC068254.2-201ENST00000623938 3577 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 MTND4P31-201ENST00000425607 1343 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 AL137100.1-201ENST00000556703 1620 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.89□□□□□ -1.63
HDAC4P56524 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
HDAC4P56524 AC114546.3-201ENST00000623582 1734 ntBASIC4.89□□□□□ -1.63
HDAC4P56524 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HDAC4P56524 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDAC4P56524 AC074029.4-201ENST00000624796 1859 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC073055.1-201ENST00000456901 1621 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HDAC4P56524 RNU6-543P-201ENST00000362576 108 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 MCTS2P-201ENST00000394552 546 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 RPL26P29-201ENST00000415623 438 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC4P56524 RPL12P34-201ENST00000424532 479 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 OSTCP5-201ENST00000425293 453 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC4P56524 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC4P56524 AL358794.1-201ENST00000445689 381 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC009963.2-201ENST00000453431 138 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 FGF7P3-201ENST00000454645 303 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AL139824.2-201ENST00000458731 1095 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 APOOP2-201ENST00000461561 539 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC083982.1-201ENST00000485679 344 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC025164.1-201ENST00000496249 478 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC020699.1-201ENST00000505161 445 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC010285.3-201ENST00000511668 676 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC083923.1-201ENST00000523708 376 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.88□□□□□ -1.63
HDAC4P56524 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC015912.2-201ENST00000571053 181 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 RN7SL652P-201ENST00000577769 300 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC110743.1-201ENST00000584870 478 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 CLIC4P2-201ENST00000601934 717 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC073091.2-201ENST00000603205 907 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC073387.2-201ENST00000604797 784 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC106052.1-201ENST00000608029 497 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC009974.1-201ENST00000608881 455 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 AC140725.3-201ENST00000616193 880 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.88□□□□□ -1.63
HDAC4P56524 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HDAC4P56524 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDAC4P56524 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC010928.1-201ENST00000592477 1447 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HDAC4P56524 AC006042.3-201ENST00000454684 1469 ntBASIC4.88□□□□□ -1.63
HDAC4P56524 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
HDAC4P56524 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HDAC4P56524 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HDAC4P56524 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.87□□□□□ -1.63
HDAC4P56524 AC012020.1-201ENST00000624541 1728 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.87□□□□□ -1.63
HDAC4P56524 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HDAC4P56524 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC140479.3-201ENST00000418944 1126 ntBASIC4.87□□□□□ -1.63
HDAC4P56524 AC246680.2-201ENST00000422106 389 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms