Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 RNU1-150P-201ENST00000362491 162 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 RNU6-694P-201ENST00000364071 147 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 AC016739.1-201ENST00000405359 345 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 MIR1203-201ENST00000408812 85 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 RNU2-50P-201ENST00000410494 143 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC009237.5-201ENST00000414271 501 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 MTCO2P5-201ENST00000422621 426 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 COX6CP15-201ENST00000426313 211 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC104837.2-201ENST00000427236 424 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC002486.1-201ENST00000435098 391 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 HSPE1P28-201ENST00000443139 211 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 RPS7P3-201ENST00000443360 580 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 DPPA3P1-201ENST00000448050 469 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 SDC4P-201ENST00000453285 601 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 C1DP4-201ENST00000455429 424 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 ACA64.1-201ENST00000459171 127 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC104164.1-201ENST00000460282 590 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.39□□□□□ -1.55
GFRA1P56159 OR52A4P-201ENST00000472867 958 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC007182.2-201ENST00000489251 402 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC114781.4-201ENST00000513707 639 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA1P56159 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA1P56159 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.39□□□□□ -1.55
GFRA1P56159 AL845331.3-202ENST00000562856 261 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC011840.5-201ENST00000582125 771 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA1P56159 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.39□□□□□ -1.55
GFRA1P56159 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 AC011468.4-201ENST00000603942 409 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC007363.1-201ENST00000604736 620 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AC008536.2-201ENST00000607284 349 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AL161734.1-201ENST00000609720 557 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AL021918.2-201ENST00000613415 194 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 AL162377.2-201ENST00000624532 337 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
GFRA1P56159 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
GFRA1P56159 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
GFRA1P56159 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA1P56159 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.39□□□□□ -1.55
GFRA1P56159 AL022323.4-201ENST00000623980 13120 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.39□□□□□ -1.55
GFRA1P56159 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
GFRA1P56159 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 Y_RNA.70-201ENST00000362886 110 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNA5SP391-201ENST00000363456 119 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RN7SKP128-201ENST00000364270 303 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-744P-201ENST00000365557 107 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 SNORA70H-201ENST00000383910 135 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-1293P-201ENST00000384077 107 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU1-74P-201ENST00000384108 171 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-1103P-201ENST00000384150 107 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 SNORA70J-201ENST00000384182 135 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-1316P-201ENST00000384242 108 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 RNU6-780P-201ENST00000391030 104 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 MRPL42P2-201ENST00000403169 426 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AL096800.1-201ENST00000405326 893 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 MYL6P5-201ENST00000412707 459 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 AC138393.2-201ENST00000414742 246 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA1P56159 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA1P56159 AC015977.1-201ENST00000418887 292 ntBASIC5.38□□□□□ -1.55
GFRA1P56159 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA1P56159 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA1P56159 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms