Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 RPL23AP93-201ENST00000440847 484 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC239367.2-201ENST00000447309 705 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC104651.2-201ENST00000447549 528 ntBASIC4.38□□□□□ -1.71
PDX1P52945 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.38□□□□□ -1.71
PDX1P52945 AC243772.1-201ENST00000451620 410 ntBASIC4.38□□□□□ -1.71
PDX1P52945 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AL445433.1-201ENST00000457507 257 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC007537.2-201ENST00000472093 511 ntBASIC4.38□□□□□ -1.71
PDX1P52945 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC010627.1-201ENST00000503819 1294 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 RFPL4AP5-201ENST00000514977 504 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.38□□□□□ -1.71
PDX1P52945 MRPL49P2-201ENST00000521066 465 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.38□□□□□ -1.71
PDX1P52945 AP001372.4-201ENST00000524889 472 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC068714.1-201ENST00000559623 800 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AL049838.1-201ENST00000563647 981 ntBASIC4.38□□□□□ -1.71
PDX1P52945 ATP5F1P7-201ENST00000567330 760 ntBASIC4.38□□□□□ -1.71
PDX1P52945 RN7SL339P-201ENST00000580597 296 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AP002906.1-201ENST00000603405 233 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC093673.2-201ENST00000609674 331 ntBASIC4.38□□□□□ -1.71
PDX1P52945 ZYXP1-201ENST00000617638 118 ntBASIC4.38□□□□□ -1.71
PDX1P52945 AC138907.10-201ENST00000623708 983 ntBASIC4.38□□□□□ -1.71
PDX1P52945 LINC01808-202ENST00000641680 1116 ntBASIC4.38□□□□□ -1.71
PDX1P52945 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
PDX1P52945 SCN1A-220ENST00000641603 12506 ntBASIC4.38□□□□□ -1.71
PDX1P52945 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.38□□□□□ -1.71
PDX1P52945 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDX1P52945 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
PDX1P52945 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 AC106754.1-201ENST00000562632 1513 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 RNU1-130P-201ENST00000363930 160 ntBASIC4.37□□□□□ -1.71
PDX1P52945 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 AC246680.2-201ENST00000422106 389 ntBASIC4.37□□□□□ -1.71
PDX1P52945 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.37□□□□□ -1.71
PDX1P52945 RPS26P2-201ENST00000440331 348 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AC068135.1-201ENST00000446164 246 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AL606517.1-201ENST00000446914 387 ntBASIC4.37□□□□□ -1.71
PDX1P52945 NUTF2P3-201ENST00000448540 384 ntBASIC4.37□□□□□ -1.71
PDX1P52945 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 OR51B8P-201ENST00000449892 769 ntBASIC4.37□□□□□ -1.71
PDX1P52945 RN7SL98P-201ENST00000462271 300 ntBASIC4.37□□□□□ -1.71
PDX1P52945 RPL7P19-201ENST00000469948 618 ntBASIC4.37□□□□□ -1.71
PDX1P52945 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 RPS4XP18-201ENST00000495480 763 ntBASIC4.37□□□□□ -1.71
PDX1P52945 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 GTF2IP9-201ENST00000502460 301 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 AC111193.1-201ENST00000504097 155 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.37□□□□□ -1.71
PDX1P52945 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 AC010376.1-201ENST00000522101 334 ntBASIC4.37□□□□□ -1.71
PDX1P52945 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.37□□□□□ -1.71
PDX1P52945 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
PDX1P52945 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 AC025884.1-201ENST00000556034 378 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.37□□□□□ -1.71
PDX1P52945 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.37□□□□□ -1.71
PDX1P52945 AP001160.4-201ENST00000596971 382 ntBASIC4.37□□□□□ -1.71
PDX1P52945 VN1R85P-201ENST00000601587 426 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AC234782.5-201ENST00000617723 324 ntBASIC4.37□□□□□ -1.71
PDX1P52945 STMN1P1-201ENST00000617809 440 ntBASIC4.37□□□□□ -1.71
PDX1P52945 AL161637.1-201ENST00000622380 412 ntBASIC4.37□□□□□ -1.71
PDX1P52945 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.37□□□□□ -1.71
PDX1P52945 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.37□□□□□ -1.71
PDX1P52945 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.37□□□□□ -1.71
PDX1P52945 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDX1P52945 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.36□□□□□ -1.71
PDX1P52945 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDX1P52945 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.36□□□□□ -1.71
PDX1P52945 AL121657.1-201ENST00000327215 531 ntBASIC4.36□□□□□ -1.71
PDX1P52945 SDHCP2-201ENST00000398565 501 ntBASIC4.36□□□□□ -1.71
PDX1P52945 MIR1303-201ENST00000408625 86 ntBASIC4.36□□□□□ -1.71
PDX1P52945 VN1R51P-201ENST00000411675 945 ntBASIC4.36□□□□□ -1.71
PDX1P52945 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms