Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MIR148B-201ENST00000362252 99 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GTF2A1P52655 HSPE1P26-201ENST00000405341 275 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC126124.2-201ENST00000413542 321 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF2A1P52655 SDCBPP3-201ENST00000419629 891 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 GTF2IP23-201ENST00000423746 351 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 DPPA2P1-201ENST00000428060 556 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.81□□□□□ -1.8
GTF2A1P52655 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC114495.1-201ENST00000441274 436 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF2A1P52655 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC147055.3-201ENST00000510547 851 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF2A1P52655 OR5BC1P-201ENST00000529327 739 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC115621.1-201ENST00000604653 858 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.81□□□□□ -1.8
GTF2A1P52655 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC007546.1-201ENST00000619452 559 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 CDRT1-208ENST00000630868 794 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.81□□□□□ -1.8
GTF2A1P52655 AC008013.2-202ENST00000637965 364 ntBASIC3.81□□□□□ -1.8
GTF2A1P52655 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.8□□□□□ -1.8
GTF2A1P52655 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.8□□□□□ -1.8
GTF2A1P52655 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 RNA5SP507-201ENST00000363603 121 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 SKINT1L-201ENST00000401057 817 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
GTF2A1P52655 RPL7AP25-201ENST00000423357 805 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2A1P52655 AP000907.1-201ENST00000428428 510 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 RPL23AP22-201ENST00000437556 453 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2A1P52655 CEACAMP7-201ENST00000444105 496 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.8□□□□□ -1.8
GTF2A1P52655 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.8□□□□□ -1.8
GTF2A1P52655 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2A1P52655 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.8□□□□□ -1.8
GTF2A1P52655 AP001781.1-201ENST00000530977 207 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.8□□□□□ -1.8
GTF2A1P52655 HMGN2P6-201ENST00000551091 273 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 MIR4506-201ENST00000584693 77 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.8□□□□□ -1.8
GTF2A1P52655 MTND5P7-201ENST00000413558 1798 ntBASIC3.8□□□□□ -1.8
GTF2A1P52655 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.8□□□□□ -1.8
GTF2A1P52655 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GTF2A1P52655 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2A1P52655 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2A1P52655 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2A1P52655 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2A1P52655 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GTF2A1P52655 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GTF2A1P52655 RNU1-130P-201ENST00000363930 160 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 MIR3065-201ENST00000390137 79 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 RPL23AP27-201ENST00000415161 451 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2A1P52655 MOB1AP1-201ENST00000430903 535 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2A1P52655 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2A1P52655 SLC31A1P1-201ENST00000451221 567 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF2A1P52655 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF2A1P52655 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2A1P52655 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2A1P52655 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF2A1P52655 EDDM3DP-201ENST00000554692 434 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 AL161713.1-201ENST00000555538 145 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.79□□□□□ -1.8
GTF2A1P52655 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
GTF2A1P52655 AL390816.3-201ENST00000604527 1066 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 AC010680.4-201ENST00000605334 543 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 AL589935.2-201ENST00000616471 1231 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.79□□□□□ -1.8
GTF2A1P52655 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GTF2A1P52655 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GTF2A1P52655 FAM35CP-201ENST00000554755 2470 ntBASIC3.79□□□□□ -1.8
GTF2A1P52655 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GTF2A1P52655 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.78□□□□□ -1.8
GTF2A1P52655 AC073073.2-201ENST00000609827 2578 ntBASIC3.78□□□□□ -1.8
GTF2A1P52655 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GTF2A1P52655 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms