Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN3P51790 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN3P51790 OR51H2P-202ENST00000641424 3046 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC010300.1-201ENST00000600671 5134 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN3P51790 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCN3P51790 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLCN3P51790 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCN3P51790 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN3P51790 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CLCN3P51790 MIR383-201ENST00000362257 73 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 RNU5E-10P-201ENST00000363506 118 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 RNU6-98P-201ENST00000384173 107 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC097374.1-203ENST00000400783 485 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 MIR921-201ENST00000401133 56 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 DNAJC19P6-201ENST00000401853 280 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AL590290.1-201ENST00000405336 380 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 HMGB3P18-201ENST00000406327 590 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 RN7SKP97-201ENST00000410966 333 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 MFSD13B-201ENST00000420133 1290 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 GTF2IP2-201ENST00000424290 697 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN3P51790 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCN3P51790 RPS26P2-201ENST00000440331 348 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 TPTE2P3-201ENST00000441562 1189 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 ARL5AP2-201ENST00000444698 533 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 SEPT14P24-201ENST00000447236 180 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN3P51790 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCN3P51790 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC008280.2-201ENST00000455473 307 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 snoU109.3-201ENST00000459477 145 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC108751.2-201ENST00000469993 231 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC010627.1-201ENST00000503819 1294 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC096571.1-202ENST00000506634 735 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 PARP4P3-201ENST00000510265 317 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC026407.1-201ENST00000518369 204 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN3P51790 AP003730.1-201ENST00000524605 285 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.83□□□□□ -1.64
CLCN3P51790 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN3P51790 AC095057.3-201ENST00000567102 1157 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 RN7SL339P-201ENST00000580597 296 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC006272.2-201ENST00000594725 163 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.83□□□□□ -1.64
CLCN3P51790 AC010857.1-201ENST00000606398 594 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AP002360.3-201ENST00000607673 710 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC093673.2-201ENST00000609674 331 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC055764.2-201ENST00000610089 670 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC004908.3-201ENST00000610248 625 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 AC138907.10-201ENST00000623708 983 ntBASIC4.83□□□□□ -1.64
CLCN3P51790 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLCN3P51790 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCN3P51790 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCN3P51790 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 AC005261.4-201ENST00000600047 1385 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 MTND4P31-201ENST00000425607 1343 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLCN3P51790 BX005019.1-201ENST00000561881 1810 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 ENSAP3-201ENST00000312710 333 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RNU6-543P-201ENST00000362576 108 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RN7SKP227-201ENST00000364445 330 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RNA5SP515-201ENST00000364570 118 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 SNORA70C-201ENST00000384538 135 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AL161909.1-201ENST00000397390 712 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCN3P51790 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 AC048351.1-201ENST00000420064 602 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCN3P51790 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCN3P51790 DDX39BP2-208ENST00000453923 258 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RPL35AP15-201ENST00000468042 339 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RPL7P19-201ENST00000469948 618 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RPS3AP6-201ENST00000484430 795 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 RN7SL691P-201ENST00000494487 301 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCN3P51790 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CLCN3P51790 AC008958.1-201ENST00000511047 682 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 MTCO1P35-201ENST00000515270 228 ntBASIC4.82□□□□□ -1.64
CLCN3P51790 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCN3P51790 AC083923.1-201ENST00000523708 376 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms