Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 AC093698.1-201ENST00000423843 571 ntBASIC6.41□□□□□ -1.38
USP11P51784 MRPS21P2-201ENST00000424704 264 ntBASIC6.41□□□□□ -1.38
USP11P51784 MTCO1P20-201ENST00000425366 358 ntBASIC6.41□□□□□ -1.38
USP11P51784 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.41□□□□□ -1.38
USP11P51784 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 AL451074.3-201ENST00000437709 472 ntBASIC6.41□□□□□ -1.38
USP11P51784 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 EEF1B2P6-201ENST00000445713 673 ntBASIC6.41□□□□□ -1.38
USP11P51784 AL596266.1-201ENST00000448132 400 ntBASIC6.41□□□□□ -1.38
USP11P51784 AL450023.1-201ENST00000450868 751 ntBASIC6.41□□□□□ -1.38
USP11P51784 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.41□□□□□ -1.38
USP11P51784 AC073522.1-201ENST00000483312 377 ntBASIC6.41□□□□□ -1.38
USP11P51784 SETP14-201ENST00000497538 873 ntBASIC6.41□□□□□ -1.38
USP11P51784 SNX5P1-201ENST00000505757 1041 ntBASIC6.41□□□□□ -1.38
USP11P51784 OR5M14P-201ENST00000506803 618 ntBASIC6.41□□□□□ -1.38
USP11P51784 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.41□□□□□ -1.38
USP11P51784 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 MTCO2P4-201ENST00000517968 247 ntBASIC6.41□□□□□ -1.38
USP11P51784 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 AP001893.2-201ENST00000526949 202 ntBASIC6.41□□□□□ -1.38
USP11P51784 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 AP001004.1-201ENST00000582468 324 ntBASIC6.41□□□□□ -1.38
USP11P51784 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.41□□□□□ -1.38
USP11P51784 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 FO393422.1-201ENST00000603908 708 ntBASIC6.41□□□□□ -1.38
USP11P51784 MIR1302-2-201ENST00000607096 138 ntBASIC6.41□□□□□ -1.38
USP11P51784 AL590282.1-201ENST00000610379 1136 ntBASIC6.41□□□□□ -1.38
USP11P51784 AC006840.1-201ENST00000623069 542 ntBASIC6.41□□□□□ -1.38
USP11P51784 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
USP11P51784 PWAR1-201ENST00000624188 2414 ntBASIC6.41□□□□□ -1.38
USP11P51784 AC117529.2-201ENST00000512159 2068 ntBASIC6.41□□□□□ -1.38
USP11P51784 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.41□□□□□ -1.38
USP11P51784 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
USP11P51784 AC010266.2-201ENST00000564741 3255 ntBASIC6.41□□□□□ -1.38
USP11P51784 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
USP11P51784 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 RARSP1-201ENST00000542842 1418 ntBASIC6.41□□□□□ -1.38
USP11P51784 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.41□□□□□ -1.38
USP11P51784 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
USP11P51784 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
USP11P51784 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.4□□□□□ -1.38
USP11P51784 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
USP11P51784 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
USP11P51784 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.4□□□□□ -1.38
USP11P51784 HMGB1P5-201ENST00000255320 642 ntBASIC6.4□□□□□ -1.38
USP11P51784 Y_RNA.296-201ENST00000364930 108 ntBASIC6.4□□□□□ -1.38
USP11P51784 RNU5E-5P-201ENST00000365379 116 ntBASIC6.4□□□□□ -1.38
USP11P51784 RN7SKP81-201ENST00000365603 331 ntBASIC6.4□□□□□ -1.38
USP11P51784 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 MIR525-201ENST00000384978 85 ntBASIC6.4□□□□□ -1.38
USP11P51784 RNU11-201ENST00000387069 134 ntBASIC6.4□□□□□ -1.38
USP11P51784 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USP11P51784 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.4□□□□□ -1.38
USP11P51784 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.4□□□□□ -1.38
USP11P51784 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.4□□□□□ -1.38
USP11P51784 TIMM9P3-201ENST00000428659 274 ntBASIC6.4□□□□□ -1.38
USP11P51784 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.4□□□□□ -1.38
USP11P51784 AC005534.2-201ENST00000431047 433 ntBASIC6.4□□□□□ -1.38
USP11P51784 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.4□□□□□ -1.38
USP11P51784 AC006335.2-201ENST00000437993 330 ntBASIC6.4□□□□□ -1.38
USP11P51784 YWHAEP1-201ENST00000453697 763 ntBASIC6.4□□□□□ -1.38
USP11P51784 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.4□□□□□ -1.38
USP11P51784 RPS3AP14-201ENST00000483907 780 ntBASIC6.4□□□□□ -1.38
USP11P51784 RPS26P24-201ENST00000497656 331 ntBASIC6.4□□□□□ -1.38
USP11P51784 AC111000.3-201ENST00000508057 576 ntBASIC6.4□□□□□ -1.38
USP11P51784 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.4□□□□□ -1.38
USP11P51784 BTG4P1-201ENST00000510421 183 ntBASIC6.4□□□□□ -1.38
USP11P51784 MTCYBP43-201ENST00000513621 740 ntBASIC6.4□□□□□ -1.38
USP11P51784 MTCO1P30-201ENST00000515244 580 ntBASIC6.4□□□□□ -1.38
USP11P51784 Y_RNA.704-201ENST00000516851 102 ntBASIC6.4□□□□□ -1.38
USP11P51784 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.4□□□□□ -1.38
USP11P51784 AF235103.2-201ENST00000525753 346 ntBASIC6.4□□□□□ -1.38
USP11P51784 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.4□□□□□ -1.38
USP11P51784 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.4□□□□□ -1.38
USP11P51784 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.4□□□□□ -1.38
USP11P51784 AC022404.1-201ENST00000555320 273 ntBASIC6.4□□□□□ -1.38
USP11P51784 AC009962.1-201ENST00000567327 3813 ntBASIC6.4□□□□□ -1.38
USP11P51784 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.4□□□□□ -1.38
USP11P51784 KPNA2P3-201ENST00000584190 848 ntBASIC6.4□□□□□ -1.38
USP11P51784 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.4□□□□□ -1.38
USP11P51784 AL390838.2-201ENST00000602394 274 ntBASIC6.4□□□□□ -1.38
USP11P51784 AC025857.2-201ENST00000602711 238 ntBASIC6.4□□□□□ -1.38
USP11P51784 AL360012.1-201ENST00000602813 131 ntBASIC6.4□□□□□ -1.38
USP11P51784 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.4□□□□□ -1.38
USP11P51784 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms