Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 STMN1P2-201ENST00000508435 439 ntBASIC6.52□□□□□ -1.37
LIG1P18858 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIG1P18858 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIG1P18858 AL671862.1-201ENST00000515851 349 ntBASIC6.52□□□□□ -1.37
LIG1P18858 RNU6-875P-201ENST00000516488 106 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AC139365.2-201ENST00000517972 253 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AC137768.1-201ENST00000549998 553 ntBASIC6.52□□□□□ -1.37
LIG1P18858 CENPUP2-201ENST00000555897 1186 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AP001004.1-201ENST00000582468 324 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.52□□□□□ -1.37
LIG1P18858 BNIP3P9-201ENST00000603714 553 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AC005084.1-201ENST00000605160 304 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AL353726.1-201ENST00000614041 1000 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AL139099.4-201ENST00000614802 114 ntBASIC6.52□□□□□ -1.37
LIG1P18858 AC011472.4-201ENST00000615848 491 ntBASIC6.52□□□□□ -1.37
LIG1P18858 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.52□□□□□ -1.37
LIG1P18858 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.52□□□□□ -1.37
LIG1P18858 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.52□□□□□ -1.37
LIG1P18858 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.52□□□□□ -1.37
LIG1P18858 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIG1P18858 AC131971.1-201ENST00000332881 1482 ntBASIC6.52□□□□□ -1.37
LIG1P18858 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIG1P18858 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
LIG1P18858 AC144833.1-201ENST00000567953 4089 ntBASIC6.52□□□□□ -1.37
LIG1P18858 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIG1P18858 AC092326.2-201ENST00000624772 1561 ntBASIC6.52□□□□□ -1.37
LIG1P18858 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LIG1P18858 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LIG1P18858 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 AC018809.2-201ENST00000602436 3823 ntBASIC6.51□□□□□ -1.37
LIG1P18858 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.51□□□□□ -1.37
LIG1P18858 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.51□□□□□ -1.37
LIG1P18858 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LIG1P18858 OR52B3P-201ENST00000314715 928 ntBASIC6.51□□□□□ -1.37
LIG1P18858 RN7SKP15-201ENST00000364742 309 ntBASIC6.51□□□□□ -1.37
LIG1P18858 Y_RNA.372-201ENST00000365599 102 ntBASIC6.51□□□□□ -1.37
LIG1P18858 SNORA70.6-201ENST00000383934 134 ntBASIC6.51□□□□□ -1.37
LIG1P18858 RNU6-297P-201ENST00000384636 107 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AL161909.1-201ENST00000397390 712 ntBASIC6.51□□□□□ -1.37
LIG1P18858 RPS3AP23-201ENST00000401762 784 ntBASIC6.51□□□□□ -1.37
LIG1P18858 FCF1P10-201ENST00000407590 479 ntBASIC6.51□□□□□ -1.37
LIG1P18858 MIR1284-201ENST00000408337 120 ntBASIC6.51□□□□□ -1.37
LIG1P18858 MIR1203-201ENST00000408812 85 ntBASIC6.51□□□□□ -1.37
LIG1P18858 RN7SKP29-201ENST00000410957 272 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.51□□□□□ -1.37
LIG1P18858 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.51□□□□□ -1.37
LIG1P18858 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.51□□□□□ -1.37
LIG1P18858 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.51□□□□□ -1.37
LIG1P18858 AC022022.1-201ENST00000430304 178 ntBASIC6.51□□□□□ -1.37
LIG1P18858 BTF3P10-201ENST00000433415 495 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.51□□□□□ -1.37
LIG1P18858 RPL7P29-201ENST00000437151 728 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AC073109.1-201ENST00000445066 978 ntBASIC6.51□□□□□ -1.37
LIG1P18858 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.51□□□□□ -1.37
LIG1P18858 PDSS1P2-201ENST00000449397 678 ntBASIC6.51□□□□□ -1.37
LIG1P18858 PSMC1P13-201ENST00000458195 985 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AP000797.1-201ENST00000478870 387 ntBASIC6.51□□□□□ -1.37
LIG1P18858 LARP1BP2-201ENST00000486594 519 ntBASIC6.51□□□□□ -1.37
LIG1P18858 RPL7P38-201ENST00000488396 739 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AC069439.1-201ENST00000494739 167 ntBASIC6.51□□□□□ -1.37
LIG1P18858 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 MTCYBP18-201ENST00000501056 747 ntBASIC6.51□□□□□ -1.37
LIG1P18858 MTCO2P30-201ENST00000503662 364 ntBASIC6.51□□□□□ -1.37
LIG1P18858 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.51□□□□□ -1.37
LIG1P18858 AP002812.4-201ENST00000532139 286 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.51□□□□□ -1.37
LIG1P18858 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.51□□□□□ -1.37
LIG1P18858 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.51□□□□□ -1.37
LIG1P18858 AC127024.5-201ENST00000580085 462 ntBASIC6.51□□□□□ -1.37
LIG1P18858 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 NANOGP3-201ENST00000605855 286 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AL158209.2-201ENST00000619266 216 ntBASIC6.51□□□□□ -1.37
LIG1P18858 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 SOCS5P3-201ENST00000425115 1576 ntBASIC6.51□□□□□ -1.37
LIG1P18858 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIG1P18858 AC017104.4-201ENST00000636283 1592 ntBASIC6.51□□□□□ -1.37
LIG1P18858 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.51□□□□□ -1.37
LIG1P18858 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.51□□□□□ -1.37
LIG1P18858 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 AP001029.2-203ENST00000589795 4910 ntBASIC6.5□□□□□ -1.37
LIG1P18858 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
LIG1P18858 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
LIG1P18858 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LIG1P18858 RNY4P14-201ENST00000363656 96 ntBASIC6.5□□□□□ -1.37
LIG1P18858 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms