Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC067959.1-201ENST00000604334 379 ntBASIC4.19□□□□□ -1.74
APOEP02649 MIR6868-201ENST00000611215 58 ntBASIC4.19□□□□□ -1.74
APOEP02649 RNA5SP196-201ENST00000625967 102 ntBASIC4.19□□□□□ -1.74
APOEP02649 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
APOEP02649 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
APOEP02649 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.19□□□□□ -1.74
APOEP02649 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
APOEP02649 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
APOEP02649 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.18□□□□□ -1.74
APOEP02649 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.18□□□□□ -1.74
APOEP02649 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
APOEP02649 PPIAP31-201ENST00000405422 495 ntBASIC4.18□□□□□ -1.74
APOEP02649 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.18□□□□□ -1.74
APOEP02649 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.18□□□□□ -1.74
APOEP02649 HMGB3P22-202ENST00000451823 572 ntBASIC4.18□□□□□ -1.74
APOEP02649 RPL23AP71-201ENST00000470966 469 ntBASIC4.18□□□□□ -1.74
APOEP02649 RPL31P61-201ENST00000496160 376 ntBASIC4.18□□□□□ -1.74
APOEP02649 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.18□□□□□ -1.74
APOEP02649 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.18□□□□□ -1.74
APOEP02649 AC091516.1-201ENST00000549191 703 ntBASIC4.18□□□□□ -1.74
APOEP02649 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.18□□□□□ -1.74
APOEP02649 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.18□□□□□ -1.74
APOEP02649 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.18□□□□□ -1.74
APOEP02649 AGGF1P8-201ENST00000562979 1000 ntBASIC4.18□□□□□ -1.74
APOEP02649 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.18□□□□□ -1.74
APOEP02649 AC015722.2-201ENST00000622210 551 ntBASIC4.18□□□□□ -1.74
APOEP02649 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.18□□□□□ -1.74
APOEP02649 AL592437.2-201ENST00000421655 2434 ntBASIC4.18□□□□□ -1.74
APOEP02649 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
APOEP02649 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
APOEP02649 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
APOEP02649 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.18□□□□□ -1.74
APOEP02649 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
APOEP02649 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
APOEP02649 XIAPP3-201ENST00000312918 795 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC007685.1-201ENST00000329806 452 ntBASIC4.17□□□□□ -1.74
APOEP02649 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.17□□□□□ -1.74
APOEP02649 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
APOEP02649 FABP12P1-201ENST00000401911 322 ntBASIC4.17□□□□□ -1.74
APOEP02649 HMGB3P19-201ENST00000403971 560 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.17□□□□□ -1.74
APOEP02649 RPL7P53-201ENST00000421245 739 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC092017.2-201ENST00000427600 362 ntBASIC4.17□□□□□ -1.74
APOEP02649 RPL7P4-203ENST00000430239 730 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC011742.1-201ENST00000431448 434 ntBASIC4.17□□□□□ -1.74
APOEP02649 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.17□□□□□ -1.74
APOEP02649 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.17□□□□□ -1.74
APOEP02649 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.17□□□□□ -1.74
APOEP02649 RPSAP41-201ENST00000439695 860 ntBASIC4.17□□□□□ -1.74
APOEP02649 RPL21P89-201ENST00000444021 467 ntBASIC4.17□□□□□ -1.74
APOEP02649 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.17□□□□□ -1.74
APOEP02649 AL161747.1-201ENST00000480068 358 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC068305.1-201ENST00000497406 726 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.17□□□□□ -1.74
APOEP02649 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.17□□□□□ -1.74
APOEP02649 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.17□□□□□ -1.74
APOEP02649 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.17□□□□□ -1.74
APOEP02649 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.17□□□□□ -1.74
APOEP02649 HMGB1P50-201ENST00000605814 607 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC128687.2-201ENST00000609657 566 ntBASIC4.17□□□□□ -1.74
APOEP02649 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.17□□□□□ -1.74
APOEP02649 MIR6500-201ENST00000622700 86 ntBASIC4.17□□□□□ -1.74
APOEP02649 AL773545.4-201ENST00000637262 310 ntBASIC4.17□□□□□ -1.74
APOEP02649 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.17□□□□□ -1.74
APOEP02649 AL513478.4-201ENST00000641636 310 ntBASIC4.17□□□□□ -1.74
APOEP02649 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.17□□□□□ -1.74
APOEP02649 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
APOEP02649 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
APOEP02649 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.16□□□□□ -1.74
APOEP02649 AC017007.4-201ENST00000503353 1352 ntBASIC4.16□□□□□ -1.74
APOEP02649 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
APOEP02649 SNORA62.2-201ENST00000364672 152 ntBASIC4.16□□□□□ -1.74
APOEP02649 RNA5SP479-201ENST00000364858 117 ntBASIC4.16□□□□□ -1.74
APOEP02649 RNA5SP283-201ENST00000365604 119 ntBASIC4.16□□□□□ -1.74
APOEP02649 MIR1193-201ENST00000408109 78 ntBASIC4.16□□□□□ -1.74
APOEP02649 HIGD1AP4-201ENST00000430194 280 ntBASIC4.16□□□□□ -1.74
APOEP02649 AC022022.1-201ENST00000430304 178 ntBASIC4.16□□□□□ -1.74
APOEP02649 RPL12P46-201ENST00000436610 195 ntBASIC4.16□□□□□ -1.74
APOEP02649 AL138787.1-202ENST00000437804 898 ntBASIC4.16□□□□□ -1.74
APOEP02649 CASP3P1-201ENST00000446037 609 ntBASIC4.16□□□□□ -1.74
APOEP02649 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.16□□□□□ -1.74
APOEP02649 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.16□□□□□ -1.74
APOEP02649 TPT1P3-201ENST00000492841 512 ntBASIC4.16□□□□□ -1.74
APOEP02649 FTH1P21-201ENST00000512179 511 ntBASIC4.16□□□□□ -1.74
APOEP02649 AC108064.1-201ENST00000513791 460 ntBASIC4.16□□□□□ -1.74
APOEP02649 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.16□□□□□ -1.74
APOEP02649 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.16□□□□□ -1.74
APOEP02649 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.16□□□□□ -1.74
APOEP02649 AC120057.2-201ENST00000571520 271 ntBASIC4.16□□□□□ -1.74
APOEP02649 MIR4286-201ENST00000580651 93 ntBASIC4.16□□□□□ -1.74
APOEP02649 FAM106CP-201ENST00000582212 507 ntBASIC4.16□□□□□ -1.74
APOEP02649 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.16□□□□□ -1.74
APOEP02649 VN1R85P-201ENST00000601587 426 ntBASIC4.16□□□□□ -1.74
APOEP02649 AC010857.1-201ENST00000606398 594 ntBASIC4.16□□□□□ -1.74
APOEP02649 AL139089.1-201ENST00000620372 975 ntBASIC4.16□□□□□ -1.74
APOEP02649 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.16□□□□□ -1.74
APOEP02649 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.16□□□□□ -1.74
APOEP02649 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms