Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CLPTM1O96005 RNA5SP151-201ENST00000365632 117 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 SNORA51.8-201ENST00000384234 132 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 RNU6-225P-201ENST00000384613 103 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 ZNF603P-201ENST00000405613 487 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AP002530.1-201ENST00000405705 684 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 RNA5SP239-201ENST00000410218 129 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 CHEK2P3-201ENST00000416118 248 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 MTCO3P4-201ENST00000419236 787 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AL138785.1-201ENST00000425821 331 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 FO393419.3-201ENST00000428741 282 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 HMGB3P5-201ENST00000428894 612 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 OR7E125P-201ENST00000443450 846 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC140172.1-201ENST00000502928 141 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 MRPS33P2-201ENST00000507850 322 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC108120.2-201ENST00000512973 294 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 RN7SKP265-201ENST00000516448 223 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC107016.1-201ENST00000550463 337 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.29□□□□□ -1.72
CLPTM1O96005 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.29□□□□□ -1.72
CLPTM1O96005 MIR4436B2-201ENST00000581415 91 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 MIR4436B1-201ENST00000583272 91 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 MIR4443-201ENST00000585052 53 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AC009318.3-201ENST00000616916 503 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 AL359715.5-201ENST00000623431 443 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.29□□□□□ -1.72
CLPTM1O96005 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.29□□□□□ -1.72
CLPTM1O96005 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLPTM1O96005 INTS6P1-201ENST00000504674 2530 ntBASIC4.29□□□□□ -1.72
CLPTM1O96005 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
CLPTM1O96005 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.28□□□□□ -1.72
CLPTM1O96005 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
CLPTM1O96005 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.28□□□□□ -1.72
CLPTM1O96005 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 Z97832.1-201ENST00000402490 328 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 HMGB1P13-201ENST00000406019 642 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 RNA5SP345-201ENST00000410646 108 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC073069.1-201ENST00000428657 441 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 RPL23AP25-201ENST00000430973 463 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC097499.1-201ENST00000444277 208 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AL031313.1-201ENST00000448435 256 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC146944.2-203ENST00000502493 354 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC139495.1-202ENST00000513164 354 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 BTF3P13-201ENST00000513224 490 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.28□□□□□ -1.72
CLPTM1O96005 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.28□□□□□ -1.72
CLPTM1O96005 IGLVIV-53-201ENST00000520107 367 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.28□□□□□ -1.72
CLPTM1O96005 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.28□□□□□ -1.72
CLPTM1O96005 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.28□□□□□ -1.72
CLPTM1O96005 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLPTM1O96005 AL132857.1-201ENST00000555180 708 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC093249.4-201ENST00000564755 259 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.28□□□□□ -1.72
CLPTM1O96005 RPP40P2-201ENST00000603596 712 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 Z82195.1-201ENST00000604558 398 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC024940.4-201ENST00000605507 246 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 RNU4-5P-201ENST00000607255 135 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.28□□□□□ -1.72
CLPTM1O96005 AC091905.2-201ENST00000623143 306 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AL109659.3-201ENST00000624985 950 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 AC097655.1-201ENST00000635075 318 ntBASIC4.28□□□□□ -1.72
CLPTM1O96005 OR6C71P-202ENST00000641886 1107 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms