Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.3□□□□□ -1.4
SOX1O00570 YWHAEP7-203ENST00000622054 312 ntBASIC6.3□□□□□ -1.4
SOX1O00570 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 AL034408.1-201ENST00000637712 664 ntBASIC6.3□□□□□ -1.4
SOX1O00570 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SOX1O00570 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.3□□□□□ -1.4
SOX1O00570 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SOX1O00570 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SOX1O00570 IMMTP1-201ENST00000435590 2219 ntBASIC6.3□□□□□ -1.4
SOX1O00570 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
SOX1O00570 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.3□□□□□ -1.4
SOX1O00570 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SOX1O00570 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.3□□□□□ -1.4
SOX1O00570 AC245100.2-201ENST00000454544 1679 ntBASIC6.3□□□□□ -1.4
SOX1O00570 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.29□□□□□ -1.4
SOX1O00570 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SOX1O00570 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 Y_RNA.126-201ENST00000363382 111 ntBASIC6.29□□□□□ -1.4
SOX1O00570 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 SNORA51.12-201ENST00000384448 134 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL390316.1-201ENST00000406279 553 ntBASIC6.29□□□□□ -1.4
SOX1O00570 RNU6-908P-201ENST00000410160 94 ntBASIC6.29□□□□□ -1.4
SOX1O00570 RNU6-195P-201ENST00000411352 109 ntBASIC6.29□□□□□ -1.4
SOX1O00570 SPA17P1-201ENST00000416656 452 ntBASIC6.29□□□□□ -1.4
SOX1O00570 MTND3P17-201ENST00000416968 344 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AC092634.6-201ENST00000418558 192 ntBASIC6.29□□□□□ -1.4
SOX1O00570 SAR1AP4-201ENST00000429225 591 ntBASIC6.29□□□□□ -1.4
SOX1O00570 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX1O00570 AC132479.1-201ENST00000449160 144 ntBASIC6.29□□□□□ -1.4
SOX1O00570 Z82190.1-201ENST00000454534 490 ntBASIC6.29□□□□□ -1.4
SOX1O00570 MEMO1P3-201ENST00000459811 302 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AC097493.1-201ENST00000463958 372 ntBASIC6.29□□□□□ -1.4
SOX1O00570 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 AC096741.1-201ENST00000472250 846 ntBASIC6.29□□□□□ -1.4
SOX1O00570 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 RN7SL604P-201ENST00000492589 296 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AC106872.3-201ENST00000495104 446 ntBASIC6.29□□□□□ -1.4
SOX1O00570 RN7SL591P-201ENST00000496150 292 ntBASIC6.29□□□□□ -1.4
SOX1O00570 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX1O00570 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX1O00570 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.29□□□□□ -1.4
SOX1O00570 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.29□□□□□ -1.4
SOX1O00570 DUX4L52-201ENST00000549363 777 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX1O00570 NMNAT1P1-201ENST00000554095 876 ntBASIC6.29□□□□□ -1.4
SOX1O00570 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 AC107954.1-201ENST00000565906 727 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.29□□□□□ -1.4
SOX1O00570 TVP23CP2-201ENST00000571473 623 ntBASIC6.29□□□□□ -1.4
SOX1O00570 MIR544B-201ENST00000582372 78 ntBASIC6.29□□□□□ -1.4
SOX1O00570 H3F3BP2-201ENST00000583907 357 ntBASIC6.29□□□□□ -1.4
SOX1O00570 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.29□□□□□ -1.4
SOX1O00570 AC022916.3-201ENST00000592961 742 ntBASIC6.29□□□□□ -1.4
SOX1O00570 VN1R80P-201ENST00000597126 338 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AC068790.4-201ENST00000602474 263 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL391646.1-201ENST00000603860 190 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL359999.1-201ENST00000604513 294 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL136363.1-201ENST00000605349 337 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL121655.1-201ENST00000605811 308 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL132765.2-201ENST00000610812 351 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL365204.3-201ENST00000612448 685 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL137067.2-201ENST00000621202 131 ntBASIC6.29□□□□□ -1.4
SOX1O00570 AL158801.5-201ENST00000623123 465 ntBASIC6.29□□□□□ -1.4
SOX1O00570 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.29□□□□□ -1.4
SOX1O00570 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
SOX1O00570 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.29□□□□□ -1.4
SOX1O00570 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.29□□□□□ -1.4
SOX1O00570 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SOX1O00570 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SOX1O00570 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.28□□□□□ -1.4
SOX1O00570 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.28□□□□□ -1.4
SOX1O00570 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.28□□□□□ -1.4
SOX1O00570 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SOX1O00570 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SOX1O00570 OR11H4-201ENST00000315409 1082 ntBASIC6.28□□□□□ -1.4
SOX1O00570 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.28□□□□□ -1.4
SOX1O00570 RPL32P3-201ENST00000359025 275 ntBASIC6.28□□□□□ -1.4
SOX1O00570 SNORA51.2-201ENST00000364595 132 ntBASIC6.28□□□□□ -1.4
SOX1O00570 RNA5SP131-201ENST00000365452 119 ntBASIC6.28□□□□□ -1.4
SOX1O00570 SNORD115.1-201ENST00000391109 76 ntBASIC6.28□□□□□ -1.4
SOX1O00570 AL023284.3-201ENST00000407767 334 ntBASIC6.28□□□□□ -1.4
SOX1O00570 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX1O00570 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.28□□□□□ -1.4
SOX1O00570 RPL17P36-201ENST00000420302 549 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms