Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AURKAPS2-201ENST00000454983 333 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 RPS4XP13-201ENST00000483219 789 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC068724.1-201ENST00000487100 792 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 BNIP3P41-201ENST00000503774 571 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 SNORA64.4-201ENST00000516632 81 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 SOD1P3-201ENST00000518682 454 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AP001636.2-201ENST00000525517 696 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC092490.3-201ENST00000545370 572 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AP000919.1-202ENST00000581139 1264 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 SNX6P1-201ENST00000601728 1224 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 MEMO1P5-201ENST00000604810 406 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC231759.1-201ENST00000616455 597 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AL392088.2-201ENST00000637607 285 ntBASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CHKB-CPT1BH3BT56 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 RNU6-1331P-201ENST00000363658 106 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 U8.9-201ENST00000365667 134 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AP002088.1-201ENST00000382740 395 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR191-201ENST00000384873 92 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR887-201ENST00000401258 79 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL583834.1-201ENST00000406943 343 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 FAR1P1-201ENST00000427163 934 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC093151.1-201ENST00000427711 313 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 RPL21P40-201ENST00000428586 483 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MRPL50P1-201ENST00000431951 384 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 CACYBPP1-201ENST00000438592 684 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 HMGB1P12-201ENST00000438594 598 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC069277.2-201ENST00000454211 432 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL161747.1-201ENST00000480068 358 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC122714.1-201ENST00000502510 459 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC010653.1-201ENST00000571108 881 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MTCO3P24-201ENST00000572729 782 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR3690-201ENST00000580266 75 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC027243.2-201ENST00000602530 724 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC006557.5-201ENST00000603126 811 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC004839.1-201ENST00000610269 501 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AL512624.1-201ENST00000613638 469 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC121761.2-201ENST00000617300 689 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC105105.5-201ENST00000622635 1294 ntBASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CHKB-CPT1BH3BT56 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CHKB-CPT1BH3BT56 CIR1P2-201ENST00000514821 1342 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms