Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.85□□□□□ -1.31
TMEM88BA6NKF7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.85□□□□□ -1.31
TMEM88BA6NKF7 PANDAR-201ENST00000629595 1506 ntBASIC6.85□□□□□ -1.31
TMEM88BA6NKF7 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TMEM88BA6NKF7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.85□□□□□ -1.31
TMEM88BA6NKF7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TMEM88BA6NKF7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 GNG5P1-201ENST00000255500 204 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 SNORA51.6-201ENST00000384151 125 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RNU6-952P-201ENST00000391164 108 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 EIF5P1-201ENST00000400019 1231 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RPS21P8-201ENST00000413365 247 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RPS3AP9-201ENST00000417027 792 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC093162.1-201ENST00000419682 124 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC069157.1-201ENST00000421749 137 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC104837.2-201ENST00000427236 424 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 MTND3P23-201ENST00000431980 347 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AL358934.1-201ENST00000432346 324 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 USP12PX-201ENST00000432383 1057 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC023347.2-201ENST00000433994 462 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC019185.1-201ENST00000442718 389 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AL512326.1-201ENST00000443050 721 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AP000893.1-201ENST00000474462 794 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RPL32P33-201ENST00000487023 394 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC007182.2-201ENST00000489251 402 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 SNRPCP2-201ENST00000504370 475 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC006390.1-201ENST00000508068 283 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC018797.3-201ENST00000513388 1241 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 Y_RNA.672-201ENST00000516289 104 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 BRD9P1-201ENST00000529855 560 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AL512310.1-201ENST00000548639 172 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RN7SL52P-201ENST00000584271 284 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC119403.2-201ENST00000590960 598 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC063977.5-201ENST00000601044 974 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC087283.1-201ENST00000604029 1074 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AC090948.2-201ENST00000607363 564 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RNU6-87P-201ENST00000607561 108 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RN7SL722P-201ENST00000617780 284 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 RN7SL565P-201ENST00000618246 284 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 GTF2IP4-201ENST00000453092 2054 ntBASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TMEM88BA6NKF7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TMEM88BA6NKF7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TMEM88BA6NKF7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.84□□□□□ -1.32
TMEM88BA6NKF7 AC009229.4-201ENST00000623854 1947 ntBASIC6.84□□□□□ -1.32
TMEM88BA6NKF7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
TMEM88BA6NKF7 AC087516.1-201ENST00000561236 2428 ntBASIC6.84□□□□□ -1.32
TMEM88BA6NKF7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 AC020633.1-201ENST00000468439 2247 ntBASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TMEM88BA6NKF7 OR4K15-201ENST00000305051 1216 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms